RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 ZNF135P52742 658 aaPredicted RBP9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 ESRRGP62508 458 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 ARF5P84085 180 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 MAPRE2Q15555 327 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 TBC1D3GQ6DHY5 549 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 TBC1D3CQ6IPX1 549 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 Q6ZVL8 140 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 ARCQ7LC44 396 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 C10orf107Q8IVU9 208 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 TBC1D3Q8IZP1 549 aaPredicted RBP9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 OR14C36Q8NHC7 312 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 C1orf74Q96LT6 269 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 RNF112Q9ULX5 631 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 MTF2Q9Y483 593 aaPredicted RBP9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 CACNA1HO95180 2353 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 FAM237BA0A1B0GVD1 139 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 ANKRD66B4E2M5 251 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 TP73O15350 636 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 TFEBP19484 476 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 SERPINB3P29508 390 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 SERPINB5P36952 375 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 RAB30Q15771 203 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 ZNF284Q2VY69 593 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 GRAMD4Q6IC98 578 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 TRMT11Q7Z4G4 463 aaKnown RBP9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 ADCK2Q7Z695 626 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 PLD6Q8N2A8 252 aaKnown RBP9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 STK40Q8N2I9 435 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 CELF5Q8N6W0 485 aaKnown RBP9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 VWCEQ96DN2 955 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 RNF31Q96EP0 1072 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 ACOX2Q99424 681 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 TRMT61BQ9BVS5 477 aaKnown RBP9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 ACAT2Q9BWD1 397 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 TMEM120AQ9BXJ8 343 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 CASS4Q9NQ75 786 aa9.02□□□□□ -0.97
CCDC144B-201ENST00000285176 NFATC1O95644 943 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 HOXD9P28356 352 aaPredicted RBP9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 RGS4P49798 205 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 SEMA3BQ13214 749 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 SETMARQ53H47 684 aaPredicted RBP9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 CCDC157Q569K6 752 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 VWA5B1Q5TIE3 1220 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 USP45Q70EL2 814 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 BEND7Q8N7W2 519 aaPredicted RBP9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 OR2AP1Q8NGE2 309 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 ZNF75CPQ92670 426 aaPredicted RBP9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 GPR21Q99679 349 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 CPNE1Q99829 537 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 NMRAL1Q9HBL8 299 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 SEMA4BQ9NPR2 832 aaPredicted RBP9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 PACSIN3Q9UKS6 424 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 PSMD13Q9UNM6 376 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 ASXL3Q9C0F0 2248 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 SLC25A14O95258 325 aaPredicted RBP9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 FGF1P05230 155 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 COPAP53621 1224 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 WDR4P57081 412 aaKnown RBP9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 UBXN2BQ14CS0 331 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 RASA2Q15283 850 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 TSTD2Q5T7W7 516 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 TMEM150AQ86TG1 271 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 ICA1LQ8NDH6 482 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 RNF217Q8TC41 542 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 SEC14L1Q92503 715 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 MTFMTQ96DP5 389 aaKnown RBP9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 CHFRQ96EP1 664 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 APOPT1Q96IL0 206 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 TRIM15Q9C019 465 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 MIR1-1HGQ9H1L0 117 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 SLC6A17Q9H1V8 727 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 CD248Q9HCU0 757 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 MRPL40Q9NQ50 206 aaKnown RBP9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 ZMYM5Q9UJ78 669 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 CFAP20Q9Y6A4 193 aaKnown RBP9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 THSD7BQ9C0I4 1608 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 MICAL3Q7RTP6 2002 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 C9JVG2 144 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 ACADMP11310 421 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 NQO1P15559 274 aaKnown RBP9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 NUDT2P50583 147 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 MESP2Q0VG99 397 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 BST1Q10588 318 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 TRIP10Q15642 601 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 AAK1Q2M2I8 961 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 FAM219BQ5XKK7 198 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 POTEHQ6S545 545 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 NPAS3Q8IXF0 933 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 POU5F2Q8N7G0 328 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 DCAKDQ8WVC6 231 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 HMGB4Q8WW32 186 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 LRRC39Q96DD0 335 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 VPS45Q9NRW7 570 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 MAGEB16A2A368 324 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 KDELR3O43731 214 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 APOA4P06727 396 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 HLA-DPA1P20036 260 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 CNTFP26441 200 aa9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 MAP4P27816 1152 aaKnown RBP9.01□□□□□ -0.97
CCDC144B-201ENST00000285176 PDE1CQ14123 709 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms