RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 ZNF180Q9UJW8 692 aa11.26□□□□□ -0.61
USP6NL-201ENST00000277575 ZNF232Q9UNY5 417 aa11.26□□□□□ -0.61
USP6NL-201ENST00000277575 FAM208AQ9UK61 1670 aaKnown RBP11.26□□□□□ -0.61
USP6NL-201ENST00000277575 NPEPPSL1A6NEC2 478 aa11.26□□□□□ -0.61
USP6NL-201ENST00000277575 URADA6NGE7 173 aa11.26□□□□□ -0.61
USP6NL-201ENST00000277575 PRR5-ARHGAP8B1AHC4 643 aa11.26□□□□□ -0.61
USP6NL-201ENST00000277575 STK16O75716 305 aa11.26□□□□□ -0.61
USP6NL-201ENST00000277575 IFNA16P05015 189 aa11.26□□□□□ -0.61
USP6NL-201ENST00000277575 ITPKAP23677 461 aa11.26□□□□□ -0.61
USP6NL-201ENST00000277575 ARHGAP8P85298 464 aa11.26□□□□□ -0.61
USP6NL-201ENST00000277575 SLC20A2Q08357 652 aa11.26□□□□□ -0.61
USP6NL-201ENST00000277575 C17orf64Q86WR6 236 aa11.26□□□□□ -0.61
USP6NL-201ENST00000277575 CAMK1DQ8IU85 385 aa11.26□□□□□ -0.61
USP6NL-201ENST00000277575 CAMKK1Q8N5S9 505 aa11.26□□□□□ -0.61
USP6NL-201ENST00000277575 ZNF184Q99676 751 aaPredicted RBP11.26□□□□□ -0.61
USP6NL-201ENST00000277575 TMEM109Q9BVC6 243 aa11.26□□□□□ -0.61
USP6NL-201ENST00000277575 CEP44Q9C0F1 390 aa11.26□□□□□ -0.61
USP6NL-201ENST00000277575 C12orf65Q9H3J6 166 aaKnown RBP11.26□□□□□ -0.61
USP6NL-201ENST00000277575 IGSF9Q9P2J2 1179 aa11.26□□□□□ -0.61
USP6NL-201ENST00000277575 MAP1BP46821 2468 aaKnown RBP11.26□□□□□ -0.61
USP6NL-201ENST00000277575 GSAPA4D1B5 854 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 FAM20BO75063 409 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 ENTPD5O75356 428 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 LRATO95237 230 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 FAM163BP0C2L3 166 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 IL1R2P27930 398 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 NMBRP28336 390 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 HOXD13P35453 343 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 NRF1Q16656 503 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 CAPN13Q6MZZ7 669 aaPredicted RBP11.25□□□□□ -0.61
USP6NL-201ENST00000277575 ZNF549Q6P9A3 640 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 BHLHB9Q6PI77 547 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 OR10G6Q8NH81 332 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 SLC35B2Q8TB61 432 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 ARNTL2Q8WYA1 636 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 MRPL48Q96GC5 212 aaKnown RBP11.25□□□□□ -0.61
USP6NL-201ENST00000277575 PIGVQ9NUD9 493 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 GRHL1Q9NZI5 618 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 TRIM38O00635 465 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 ATG13O75143 517 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 PAICSP22234 425 aaKnown RBP11.25□□□□□ -0.61
USP6NL-201ENST00000277575 IFNGR2P38484 337 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 CYP1B1Q16678 543 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 TSSK3Q96PN8 268 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 OR52E6Q96RD3 313 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 GKN1Q9NS71 199 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 C15orf41Q9Y2V0 281 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 ASB3Q9Y575 518 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 RFXANKO14593 260 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 FGFR3P22607 806 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 CYP4F8P98187 520 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 CBX2Q14781 532 aaPredicted RBP11.25□□□□□ -0.61
USP6NL-201ENST00000277575 USP39Q53GS9 565 aaKnown RBP11.25□□□□□ -0.61
USP6NL-201ENST00000277575 FSTL4Q6MZW2 842 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 APLFQ8IW19 511 aaPredicted RBP11.25□□□□□ -0.61
USP6NL-201ENST00000277575 ZC3H7AQ8IWR0 971 aaKnown RBP11.25□□□□□ -0.61
USP6NL-201ENST00000277575 BRSK1Q8TDC3 778 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 HEPHQ9BQS7 1158 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 TLR6Q9Y2C9 796 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 FOXO6A8MYZ6 492 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 C9IYK1 514 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 TNFAIP8O95379 198 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 METTL18O95568 372 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 CCND3P30281 292 aaPredicted RBP11.25□□□□□ -0.61
USP6NL-201ENST00000277575 PSMD8P48556 350 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 GJA9P57773 515 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 CAP1Q01518 475 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.25□□□□□ -0.61
USP6NL-201ENST00000277575 ARL13AQ5H913 290 aaPredicted RBP11.25□□□□□ -0.61
USP6NL-201ENST00000277575 AADATQ8N5Z0 425 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 RERGQ96A58 199 aaPredicted RBP11.25□□□□□ -0.61
USP6NL-201ENST00000277575 CLIP3Q96DZ5 547 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 TCF12Q99081 682 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 RPS6KA6Q9UK32 745 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 TPRKBQ9Y3C4 175 aa11.25□□□□□ -0.61
USP6NL-201ENST00000277575 A0A1W2PRU2 124 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 SLC7A4O43246 635 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 SLC22A3O75751 556 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 TMEM63AO94886 807 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 UMPSP11172 480 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 SOX6P35712 828 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 CHRNA4P43681 627 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 IDH2P48735 452 aaKnown RBP11.24□□□□□ -0.61
USP6NL-201ENST00000277575 SLC7A2P52569 658 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 TXNRD3NBQ6F5E7 133 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 TRMT10BQ6PF06 316 aaKnown RBP11.24□□□□□ -0.61
USP6NL-201ENST00000277575 TMC5Q6UXY8 1006 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 NET1Q7Z628 596 aaPredicted RBP11.24□□□□□ -0.61
USP6NL-201ENST00000277575 OR14C36Q8NHC7 312 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 MAGEE2Q8TD90 523 aaPredicted RBP11.24□□□□□ -0.61
USP6NL-201ENST00000277575 BCO2Q9BYV7 579 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 ACSS2Q9NR19 701 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 GDAP2Q9NXN4 497 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 MYRFQ9Y2G1 1151 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 YIPF1Q9Y548 306 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 OR2AG2A6NM03 316 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 OR10H2O60403 315 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 PLIN3O60664 434 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 NR2F1P10589 423 aa11.24□□□□□ -0.61
USP6NL-201ENST00000277575 VAV1P15498 845 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms