RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 LPPQ93052 612 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 VPS50Q96JG6 964 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 GAD1Q99259 594 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 TBC1D23Q9NUY8 699 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 CDH7Q9ULB5 785 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 DDNO94850 711 aaPredicted RBP27.44■■□□□ 1.98
CBX4-201ENST00000269397 UGT1A1P22309 533 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 UGT1A4P22310 534 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 UGT1A3P35503 534 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 UGT1A5P35504 534 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 POLR2IP36954 125 aaKnown RBP27.44■■□□□ 1.98
CBX4-201ENST00000269397 LHX1P48742 406 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 GSK3BP49841 420 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 OR4D1Q15615 310 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 SLC14A2Q15849 920 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 ZIK1Q3SY52 487 aaPredicted RBP27.44■■□□□ 1.98
CBX4-201ENST00000269397 IRAK1BP1Q5VVH5 260 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 TBPL2Q6SJ96 375 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 SPRED1Q7Z699 444 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 LRRC43Q8N309 656 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 SMPD3Q9NY59 655 aaPredicted RBP27.44■■□□□ 1.98
CBX4-201ENST00000269397 POLG2Q9UHN1 485 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 SH3GLB1Q9Y371 365 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 TIMM22Q9Y584 194 aa27.44■■□□□ 1.98
CBX4-201ENST00000269397 KPNA6O60684 536 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 ZNF182P17025 639 aaPredicted RBP27.43■■□□□ 1.98
CBX4-201ENST00000269397 DSC2Q02487 901 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 BNIP2Q12982 314 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 NFYCQ13952 458 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 PYCR3Q53H96 274 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 PRAMEF19Q5SWL8 479 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 OTUD3Q5T2D3 398 aaPredicted RBP27.43■■□□□ 1.98
CBX4-201ENST00000269397 TMTC4Q5T4D3 741 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 DPP9Q86TI2 863 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 GPRC5AQ8NFJ5 357 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 PABPC5Q96DU9 382 aaKnown RBP27.43■■□□□ 1.98
CBX4-201ENST00000269397 TRIM64A6NGJ6 449 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 J3QRK9 145 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 ZNF701M0R085 212 aaPredicted RBP27.43■■□□□ 1.98
CBX4-201ENST00000269397 CAPGP40121 348 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 SCIMPQ6UWF3 145 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 GPC2Q8N158 579 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 SLC16A10Q8TF71 515 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 TANKQ92844 425 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 FBXL8Q96CD0 374 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 ALG2Q9H553 416 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 CATSPERBQ9H7T0 1116 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 MIOSQ9NXC5 875 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 HACD3Q9P035 362 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 PCDHA9Q9Y5H5 950 aa27.43■■□□□ 1.98
CBX4-201ENST00000269397 MIA3Q5JRA6 1907 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 J3KR12 359 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 ZBTB11O95625 1053 aaPredicted RBP27.42■■□□□ 1.98
CBX4-201ENST00000269397 CD1DP15813 335 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 DCKP27707 260 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 CCR1P32246 355 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 RPS9P46781 194 aaKnown RBP27.42■■□□□ 1.98
CBX4-201ENST00000269397 CBX3Q13185 183 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 PRMT9Q6P2P2 845 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 PPP1R14BQ96C90 147 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 SEZ6LQ9BYH1 1024 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 TMEM165Q9HC07 324 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 TMLHEQ9NVH6 421 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 GID8Q9NWU2 228 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 IRAK2O43187 625 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 GJB3O75712 270 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 EEF1B2P24534 225 aaKnown RBP27.42■■□□□ 1.98
CBX4-201ENST00000269397 ELK4P28324 431 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 RFC2P35250 354 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 PAGE3Q5JUK9 113 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 CASP10Q92851 521 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 TMEM125Q96AQ2 219 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 TBATAQ96M53 351 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 SEMA4BQ9NPR2 832 aaPredicted RBP27.42■■□□□ 1.98
CBX4-201ENST00000269397 TBCCD1Q9NVR7 557 aa27.42■■□□□ 1.98
CBX4-201ENST00000269397 C21orf59P57076 290 aa27.41■■□□□ 1.98
CBX4-201ENST00000269397 CDC42EP1Q00587 391 aa27.41■■□□□ 1.98
CBX4-201ENST00000269397 LIPEQ05469 1076 aa27.41■■□□□ 1.98
CBX4-201ENST00000269397 SLC10A7Q0GE19 358 aa27.41■■□□□ 1.98
CBX4-201ENST00000269397 TRAF2Q12933 501 aa27.41■■□□□ 1.98
CBX4-201ENST00000269397 SLC44A4Q53GD3 710 aa27.41■■□□□ 1.98
CBX4-201ENST00000269397 ZNF549Q6P9A3 640 aa27.41■■□□□ 1.98
CBX4-201ENST00000269397 KCTD14Q9BQ13 255 aaPredicted RBP27.41■■□□□ 1.98
CBX4-201ENST00000269397 MTG1Q9BT17 334 aaPredicted RBP27.41■■□□□ 1.98
CBX4-201ENST00000269397 PTCH2Q9Y6C5 1203 aa27.41■■□□□ 1.98
CBX4-201ENST00000269397 ZNF354CQ86Y25 554 aa27.41■■□□□ 1.98
CBX4-201ENST00000269397 ZC3H7AQ8IWR0 971 aaKnown RBP27.41■■□□□ 1.98
CBX4-201ENST00000269397 HASPINQ8TF76 798 aa27.41■■□□□ 1.98
CBX4-201ENST00000269397 CDCA5Q96FF9 252 aa27.41■■□□□ 1.98
CBX4-201ENST00000269397 PLEKHA8Q96JA3 519 aa27.41■■□□□ 1.98
CBX4-201ENST00000269397 TMEM209Q96SK2 561 aa27.41■■□□□ 1.98
CBX4-201ENST00000269397 SDR39U1Q9NRG7 319 aaPredicted RBP27.41■■□□□ 1.98
CBX4-201ENST00000269397 WISP3O95389 354 aaPredicted RBP27.4■■□□□ 1.98
CBX4-201ENST00000269397 LBPP18428 481 aa27.4■■□□□ 1.98
CBX4-201ENST00000269397 MATN1P21941 496 aa27.4■■□□□ 1.98
CBX4-201ENST00000269397 ATP1A4Q13733 1029 aa27.4■■□□□ 1.98
CBX4-201ENST00000269397 ARTNQ5T4W7 220 aa27.4■■□□□ 1.98
CBX4-201ENST00000269397 NANOGP8Q6NSW7 305 aa27.4■■□□□ 1.98
CBX4-201ENST00000269397 BLOC1S3Q6QNY0 202 aa27.4■■□□□ 1.98
CBX4-201ENST00000269397 CDH9Q9ULB4 789 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms