RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 TCF3P15923 654 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 AP3S2P59780 193 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 IL23RQ5VWK5 629 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 CMC1Q7Z7K0 106 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 SCN4BQ8IWT1 228 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 CSGALNACT1Q8TDX6 532 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 CHPT1Q8WUD6 406 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 KBTBD7Q8WVZ9 684 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 CRLS1Q9UJA2 301 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 PIN4Q9Y237 131 aaKnown RBP11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 GRIP1Q9Y3R0 1128 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 UBE2QL1A1L167 161 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 MAPK8P45983 427 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 ZNF404Q494X3 552 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 PIGGQ5H8A4 983 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 UBE2E3Q969T4 207 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 SPATA17Q96L03 361 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 CAB39LQ9H9S4 337 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 FNIP2Q9P278 1114 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 BAIAP2Q9UQB8 552 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 FAM240BA0A1B0GVZ2 78 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 LTFP02788 710 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 DBTP11182 482 aaKnown RBP11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 NUP62P37198 522 aaPredicted RBP11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 RALGDSQ12967 914 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 BNIP3Q12983 259 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 CRY1Q16526 586 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 KIAA0930Q6ICG6 404 aaPredicted RBP11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 PLEKHG7Q6ZR37 379 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 BNIPLQ7Z465 357 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 KCNN2Q9H2S1 579 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 C2orf71A6NGG8 1288 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 MMP10P09238 476 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 ZIK1Q3SY52 487 aaPredicted RBP11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 STYK1Q6J9G0 422 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 MTIF3Q9H2K0 278 aaKnown RBP11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 SNX6Q9UNH7 406 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 CXCL8P10145 99 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 GSTM2P28161 218 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 HERVK_113P63132 956 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 ATP6AP1Q15904 470 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 TEX44Q53QW1 395 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 FAM183BPQ6ZVS7 135 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 ATL1Q8WXF7 558 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 CSPG4P5Q96PW8 444 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 ERVK-6Q9BXR3 956 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 EPB42P16452 691 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 DNAJB13P59910 316 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 PLCL1Q15111 1095 aa11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 ZNF57Q68EA5 555 aaPredicted RBP11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 TSEN34Q9BSV6 310 aaKnown RBP11.66□□□□□ -0.54
DNMT3A-201ENST00000264709 A0A1W2PRG6 482 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 ELOVL7A1L3X0 281 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 FUOMA2VDF0 154 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 EI24O14681 340 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 CHST10O43529 356 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 CILPO75339 1184 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 ITPK1Q13572 414 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 CNDP2Q96KP4 475 aaKnown RBP11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 ARMC1Q9NVT9 282 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 RAD17O75943 681 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 SLC2A4P14672 509 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 HNRNPLP14866 589 aaKnown RBP eCLIP11.65□□□□□ -0.542e-11■■■■□ 20.2
DNMT3A-201ENST00000264709 TXNL4AP83876 142 aaKnown RBP11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 TEAD4Q15561 434 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 RNF19BQ6ZMZ0 732 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 NELL1Q92832 810 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 UTP4Q969X6 686 aaKnown RBP11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 PRDM8Q9NQV8 689 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 SH3BP4Q9P0V3 963 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 C2CD4BA6NLJ0 364 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 K7EPI3 171 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 SYTL3Q4VX76 610 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 ZRANB3Q5FWF4 1079 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 ZNF517Q6ZMY9 492 aaPredicted RBP11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 P2RY11Q96G91 374 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 PWWP2AQ96N64 755 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 ANKRA2Q9H9E1 313 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 LSM7Q9UK45 103 aaKnown RBP11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 SCAF8Q9UPN6 1271 aaKnown RBP11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 MAN2B2Q9Y2E5 1009 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 DGKBQ9Y6T7 804 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 CNPP09543 421 aaKnown RBP11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 MILR1Q7Z6M3 343 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 SPEF1Q9Y4P9 236 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 FAM234BA2RU67 622 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 KPNA5O15131 536 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 DHX15O43143 795 aaKnown RBP11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 T-ENOLP0DO92 83 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 TCF4P15884 667 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 IVDP26440 423 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 DGKKQ5KSL6 1271 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 GK5Q6ZS86 529 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 BTN2A2Q8WVV5 523 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 SLC38A2Q96QD8 506 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 SPATA5L1Q9BVQ7 753 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 GNG14A0A1W2PPG7 69 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 SEC22BO75396 215 aa11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 MBL2P11226 248 aaPredicted RBP11.65□□□□□ -0.54
DNMT3A-201ENST00000264709 OR2B6P58173 313 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms