RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 SERPINH1P50454 418 aaKnown RBP16.25■□□□□ 0.19
GPC1-201ENST00000264039 NR6A1Q15406 480 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 TRNP1Q6NT89 227 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 CCBE1Q6UXH8 406 aaPredicted RBP16.25■□□□□ 0.19
GPC1-201ENST00000264039 MMAAQ8IVH4 418 aaKnown RBP16.25■□□□□ 0.19
GPC1-201ENST00000264039 CEP97Q8IW35 865 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 ELMOD2Q8IZ81 293 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 TTC30BQ8N4P2 665 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 ATPAF2Q8N5M1 289 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 BLOC1S5Q8TDH9 187 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 SKA2Q8WVK7 121 aaPredicted RBP16.25■□□□□ 0.19
GPC1-201ENST00000264039 GPRASP2Q96D09 838 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 CHCHD6Q9BRQ6 235 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 TRIT1Q9H3H1 467 aaKnown RBP16.25■□□□□ 0.19
GPC1-201ENST00000264039 NSMCE4AQ9NXX6 385 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 PLCH1Q4KWH8 1693 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 LRRC14BA6NHZ5 514 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 CILPO75339 1184 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 RFPL2O75678 378 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 MMP10P09238 476 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 BMP2P12643 396 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 NAT1P18440 290 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 POLR2IP36954 125 aaKnown RBP16.25■□□□□ 0.19
GPC1-201ENST00000264039 ARSFP54793 590 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 ZC3HC1Q86WB0 502 aaKnown RBP16.25■□□□□ 0.19
GPC1-201ENST00000264039 GALNT12Q8IXK2 581 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 ANKFN1Q8N957 763 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 RPL3LQ92901 407 aaKnown RBP16.25■□□□□ 0.19
GPC1-201ENST00000264039 CCDC126Q96EE4 140 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 HOPXQ9BPY8 73 aaPredicted RBP16.25■□□□□ 0.19
GPC1-201ENST00000264039 NANOGQ9H9S0 305 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 ZNF70Q9UC06 446 aaPredicted RBP16.25■□□□□ 0.19
GPC1-201ENST00000264039 C3orf18Q9UK00 162 aa16.25■□□□□ 0.19
GPC1-201ENST00000264039 ATG7O95352 703 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 ABCB1P08183 1280 aaPredicted RBP16.24■□□□□ 0.19
GPC1-201ENST00000264039 CD36P16671 472 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 APLP1P51693 650 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 OR2B6P58173 313 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 PITX1P78337 314 aaPredicted RBP16.24■□□□□ 0.19
GPC1-201ENST00000264039 NOMO2Q5JPE7 1267 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 PRMT9Q6P2P2 845 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 LINC00523Q86TU6 105 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 TICAM1Q8IUC6 712 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 BIRC7Q96CA5 298 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 ATP13A3Q9H7F0 1226 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 TOR4AQ9NXH8 423 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 USE1Q9NZ43 259 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 TPRKBQ9Y3C4 175 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 A0A1W2PQ67 120 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 A0A1W2PQ72 361 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 LOC110117498-PIK3R3F6TDL0 507 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 SULT1C4O75897 302 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 EDN1P05305 212 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 LTA4HP09960 611 aaKnown RBP16.24■□□□□ 0.19
GPC1-201ENST00000264039 CHRNA5P30532 468 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 ZNF132P52740 706 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 CD83Q01151 205 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 DAG1Q14118 895 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 VPS72Q15906 364 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 SOWAHAQ2M3V2 549 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 EFL1Q7Z2Z2 1120 aaKnown RBP16.24■□□□□ 0.19
GPC1-201ENST00000264039 CDYL2Q8N8U2 506 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 UTP15Q8TED0 518 aaKnown RBP16.24■□□□□ 0.19
GPC1-201ENST00000264039 KCNS3Q9BQ31 491 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 FDXACB1Q9BRP7 624 aaPredicted RBP16.24■□□□□ 0.19
GPC1-201ENST00000264039 IDI2Q9BXS1 227 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 RNF112Q9ULX5 631 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 KLHL20Q9Y2M5 609 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 GMPPBQ9Y5P6 360 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 AQP12BA6NM10 295 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 TBKBP1A7MCY6 615 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 TRIM24O15164 1050 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 SHMT2P34897 504 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 IL12RB1P42701 662 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 HSD17B4P51659 736 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 RACK1P63244 317 aaKnown RBP16.24■□□□□ 0.19
GPC1-201ENST00000264039 GRB7Q14451 532 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 SLC36A3Q495N2 470 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 TRIM48Q8IWZ4 208 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 AQP12AQ8IXF9 295 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 TWIST2Q8WVJ9 160 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 CDT1Q9H211 546 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 STMN3Q9NZ72 180 aa16.24■□□□□ 0.19
GPC1-201ENST00000264039 PPP6CO00743 305 aa16.23■□□□□ 0.19
GPC1-201ENST00000264039 AZIN1O14977 448 aa16.23■□□□□ 0.19
GPC1-201ENST00000264039 GPIP06744 558 aa16.23■□□□□ 0.19
GPC1-201ENST00000264039 C8BP07358 591 aa16.23■□□□□ 0.19
GPC1-201ENST00000264039 CHRM5P08912 532 aaPredicted RBP16.23■□□□□ 0.19
GPC1-201ENST00000264039 MLLT10P55197 1068 aa16.23■□□□□ 0.19
GPC1-201ENST00000264039 KCNAB2Q13303 367 aa16.23■□□□□ 0.19
GPC1-201ENST00000264039 NPTX1Q15818 432 aa16.23■□□□□ 0.19
GPC1-201ENST00000264039 ZCCHC8Q6NZY4 707 aaKnown RBP16.23■□□□□ 0.19
GPC1-201ENST00000264039 FAM117BQ6P1L5 589 aa16.23■□□□□ 0.19
GPC1-201ENST00000264039 ZPBP2Q6X784 338 aa16.23■□□□□ 0.19
GPC1-201ENST00000264039 HIPK1Q86Z02 1210 aa16.23■□□□□ 0.19
GPC1-201ENST00000264039 ALDH16A1Q8IZ83 802 aa16.23■□□□□ 0.19
GPC1-201ENST00000264039 CLYBLQ8N0X4 340 aa16.23■□□□□ 0.19
GPC1-201ENST00000264039 CLEC4DQ8WXI8 215 aa16.23■□□□□ 0.19
GPC1-201ENST00000264039 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.23■□□□□ 0.192e-6■■■■■ 54.9
GPC1-201ENST00000264039 RBM22Q9NW64 420 aaKnown RBP eCLIP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms