RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 ZNF140P52738 457 aaPredicted RBP13.56□□□□□ -0.24
VMP1-201ENST00000262291 EPHB1P54762 984 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 SPDYAQ5MJ70 313 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 TMEM198Q66K66 360 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 PSAPL1Q6NUJ1 521 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 TRIM67Q6ZTA4 783 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 EFCAB3Q8N7B9 438 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 INPP5DQ92835 1189 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 LRRC3Q9BY71 257 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 ILKAPQ9H0C8 392 aaPredicted RBP13.56□□□□□ -0.24
VMP1-201ENST00000262291 GTSE1Q9NYZ3 720 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 BLOC1S6Q9UL45 172 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 OR51B4Q9Y5P0 310 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 PLXNA4Q9HCM2 1894 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 A0A087X1B8 175 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 CCDC22O60826 627 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 LTA4HP09960 611 aaKnown RBP13.56□□□□□ -0.24
VMP1-201ENST00000262291 EN2P19622 333 aaPredicted RBP13.56□□□□□ -0.24
VMP1-201ENST00000262291 LMAN2Q12907 356 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 RCN1Q15293 331 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 DBN1Q16643 649 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 PABPC1LQ4VXU2 614 aaKnown RBP13.56□□□□□ -0.24
VMP1-201ENST00000262291 ZRANB3Q5FWF4 1079 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 TECRLQ5HYJ1 363 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 NXNQ6DKJ4 435 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 ALG1LQ6GMV1 187 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.56□□□□□ -0.24
VMP1-201ENST00000262291 RBM15BQ8NDT2 890 aaKnown RBP13.56□□□□□ -0.24
VMP1-201ENST00000262291 SREK1Q8WXA9 508 aaKnown RBP13.56□□□□□ -0.24
VMP1-201ENST00000262291 PTERQ96BW5 349 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 PCDHGA4Q9Y5G9 962 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 SLC4A7Q9Y6M7 1214 aa13.56□□□□□ -0.24
VMP1-201ENST00000262291 TYW5A2RUC4 315 aaKnown RBP13.55□□□□□ -0.24
VMP1-201ENST00000262291 ANKRD66B4E2M5 251 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 LEFTY2O00292 366 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 GSC2O15499 205 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 KRT36O76013 467 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 ARHGEF15O94989 841 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 EPOP01588 193 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 SERPINA6P08185 405 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 IRS1P35568 1242 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 RASSF2P50749 326 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 INHBCP55103 352 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 MTA1Q13330 715 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 KRT72Q14CN4 511 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 FAM83EQ2M2I3 478 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 MRNIPQ6NTE8 343 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 MCUR1Q96AQ8 359 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 ALG14Q96F25 216 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 TRAPPC9Q96Q05 1148 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 MRPL57Q9BQC6 102 aaKnown RBP13.55□□□□□ -0.24
VMP1-201ENST00000262291 DRC3Q9H069 523 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.55□□□□□ -0.24
VMP1-201ENST00000262291 LRCH1Q9Y2L9 728 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 HCFC2Q9Y5Z7 792 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 OBSL1O75147 1896 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 IQCF5A8MTL0 148 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 H3BMM5 538 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 PER2O15055 1255 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 CRTAMO95727 393 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 APOA4P06727 396 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 MC4RP32245 332 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 PPP3CCP48454 512 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 CNPY1Q3B7I2 92 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 LRRC73Q5JTD7 316 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 LILRA6Q6PI73 481 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 NCEH1Q6PIU2 408 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 ENDOVQ8N8Q3 282 aaKnown RBP13.55□□□□□ -0.24
VMP1-201ENST00000262291 ARMC5Q96C12 935 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 EID2BQ96D98 161 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 C17orf80Q9BSJ5 609 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 SARS2Q9NP81 518 aaKnown RBP13.55□□□□□ -0.24
VMP1-201ENST00000262291 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.55□□□□□ -0.24
VMP1-201ENST00000262291 NCKIPSDQ9NZQ3 722 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 LSM7Q9UK45 103 aaKnown RBP13.55□□□□□ -0.24
VMP1-201ENST00000262291 A8MT66 165 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 TMEM114B3SHH9 223 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 TRIM24O15164 1050 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 GRID2O43424 1007 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 RHOBTB1O94844 696 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 OLFM2O95897 454 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 COL6A2P12110 1019 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 CDH13P55290 713 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 SLC25A3Q00325 362 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 ACVR1Q04771 509 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 TEAD2Q15562 447 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 SH2D4BQ5SQS7 431 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 AGAP9Q5VTM2 703 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 TAS2R42Q7RTR8 314 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 LYSMD3Q7Z3D4 306 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 ING5Q8WYH8 240 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 SLC30A3Q99726 388 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 NLE1Q9NVX2 485 aaPredicted RBP13.55□□□□□ -0.24
VMP1-201ENST00000262291 DNAJC28Q9NX36 388 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 STOML2Q9UJZ1 356 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 IKZF3Q9UKT9 509 aa13.55□□□□□ -0.24
VMP1-201ENST00000262291 INTS6Q9UL03 887 aaKnown RBP13.55□□□□□ -0.24
VMP1-201ENST00000262291 TRAV19A0A0A6YYK7 116 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 C2orf81A6NN90 581 aa13.54□□□□□ -0.24
VMP1-201ENST00000262291 ADH1AP07327 375 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms