RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 SMAD1Q15797 465 aaKnown RBP15.76■□□□□ 0.11
CCDC90B-201ENST00000260054 ALS2CLQ60I27 953 aa15.76■□□□□ 0.11
CCDC90B-201ENST00000260054 CYP2U1Q7Z449 544 aa15.76■□□□□ 0.11
CCDC90B-201ENST00000260054 LONP2Q86WA8 852 aa15.76■□□□□ 0.11
CCDC90B-201ENST00000260054 UNC5BQ8IZJ1 945 aa15.76■□□□□ 0.11
CCDC90B-201ENST00000260054 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.76■□□□□ 0.11
CCDC90B-201ENST00000260054 CAVIN3Q969G5 261 aa15.76■□□□□ 0.11
CCDC90B-201ENST00000260054 SPACA7Q96KW9 195 aa15.76■□□□□ 0.11
CCDC90B-201ENST00000260054 PLXND1Q9Y4D7 1925 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 CCDC151A5D8V7 595 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 RGSL1A5PLK6 1076 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 OR51F1A6NGY5 319 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 H7C0S8 307 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 LATO43561 262 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 VAPBO95292 243 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 PAK4O96013 591 aaPredicted RBP15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 IGHV4-34P06331 123 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 SPAM1P38567 509 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 DCDC1P59894 354 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 PEX6Q13608 980 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 BRD3Q15059 726 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 AGERQ15109 404 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 SPANXN3Q5MJ09 141 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 KIAA0895LQ68EN5 471 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 KIAA0930Q6ICG6 404 aaPredicted RBP15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 TRMT10BQ6PF06 316 aaKnown RBP15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 C3orf62Q6ZUJ4 267 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 RAVER1Q8IY67 606 aaKnown RBP15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 PELI3Q8N2H9 469 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 GSDMBQ8TAX9 411 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 NUS1Q96E22 293 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 PLEKHG4BQ96PX9 1271 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 SLC17A9Q9BYT1 436 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 ABCG8Q9H221 673 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 FAM83DQ9H4H8 585 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 NFKBIL1Q9UBC1 381 aaPredicted RBP15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 DOCK9Q9BZ29 2069 aa15.75■□□□□ 0.11
CCDC90B-201ENST00000260054 CCDC162PA2VCL2 907 aa15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 GPR39O43194 453 aa15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 NDUFS2O75306 463 aa15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 ACSL3O95573 720 aa15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 GOT2P00505 430 aaKnown RBP15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 PAMP19021 973 aa15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 MC4RP32245 332 aa15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 PRAMEP78395 509 aa15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 SRSF5Q13243 272 aaKnown RBP15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 SGCGQ13326 291 aa15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 ANGPT1Q15389 498 aa15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 HENMT1Q5T8I9 393 aaKnown RBP15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 FAM151BQ6UXP7 276 aa15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 TRMT10CQ7L0Y3 403 aaKnown RBP15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 NRSN1Q8IZ57 195 aa15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 NELL1Q92832 810 aa15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 BIRC7Q96CA5 298 aa15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 AP2M1Q96CW1 435 aa15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 TTC25Q96NG3 672 aa15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 AGAP2Q99490 1192 aa15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 RIOK2Q9BVS4 552 aaKnown RBP15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 EPB41L4BQ9H329 900 aa15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 VPS37BQ9H9H4 285 aa15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 EBF2Q9HAK2 575 aa15.74■□□□□ 0.11
CCDC90B-201ENST00000260054 GLYATL1P3A0A0U1RQE8 302 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 GOLGA8KD6RF30 607 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 GOLGA8TH3BQL2 631 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 RAD51BO15315 384 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 SLC31A1O15431 190 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 RIPK2O43353 540 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 FSBPO95073 299 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 PRAMEF1O95521 474 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 SP9P0CG40 484 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 CCR5P51681 352 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 RPL6Q02878 288 aaKnown RBP15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 LONRF1Q17RB8 773 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 WSCD2Q2TBF2 565 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 MAP9Q49MG5 647 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 ZDHHC20Q5W0Z9 365 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 ZNF765Q7L2R6 523 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 PTAR1Q7Z6K3 402 aaPredicted RBP15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 DEFB119Q8N690 84 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 TP53I13Q8NBR0 393 aaPredicted RBP15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 OR6P1Q8NGX9 317 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 CERS2Q96G23 380 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 KLF6Q99612 283 aaPredicted RBP15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 CDH19Q9H159 772 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 RAD18Q9NS91 495 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 C20orf96Q9NUD7 363 aaPredicted RBP15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 MOCS1Q9NZB8 636 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 APPL1Q9UKG1 709 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 WDFY4Q6ZS81 3184 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 ZNF106Q9H2Y7 1883 aaKnown RBP15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 TCRBV9S1A1TA0A576 114 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 K7ESM1 405 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 ERLIN1O75477 346 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 SRP72O76094 671 aaKnown RBP15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 SOD1P00441 154 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 GSTA2P09210 222 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 PRSS56P0CW18 603 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 ERVK-10P10266 1014 aa15.73■□□□□ 0.11
CCDC90B-201ENST00000260054 CA5AP35218 305 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms