RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 ZYG11AQ6WRX3 759 aa14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 RBM23Q86U06 439 aaKnown RBP14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 DDIASQ8IXT1 998 aa14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 CEP70Q8NHQ1 597 aa14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 CALML6Q8TD86 181 aa14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 C1QTNF1Q9BXJ1 281 aa14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 KLHL4Q9C0H6 718 aa14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 VCX3BQ9H321 246 aa14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 VCX3AQ9NNX9 186 aa14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 VPS45Q9NRW7 570 aa14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 GALPQ9UBC7 116 aa14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 NYNRINQ9P2P1 1898 aaKnown RBP14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 TYW5A2RUC4 315 aaKnown RBP14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 NIPSNAP2O75323 286 aa14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 PAX3P23760 479 aa14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 ECT2LQ008S8 904 aa14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 PDK3Q15120 406 aa14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 ARMC12Q5T9G4 340 aa14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 FAM151BQ6UXP7 276 aa14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 DRAXINQ8NBI3 349 aaPredicted RBP14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 ZNF784Q8NCA9 323 aaPredicted RBP14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 MDGA1Q8NFP4 955 aa14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 CDKN2AIPNLQ96HQ2 116 aa14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 NSUN5Q96P11 429 aaKnown RBP14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 LIN28AQ9H9Z2 209 aaKnown RBP14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 SEMA4BQ9NPR2 832 aaPredicted RBP14.62□□□□□ -0.07
TRAFD1-201ENST00000257604 NRG2O14511 850 aaPredicted RBP14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 CRCPO75575 148 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 S1PR4O95977 384 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 LRG1P02750 347 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 SOD2P04179 222 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 LTA4HP09960 611 aaKnown RBP14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 STK19P49842 368 aaPredicted RBP14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 YBEYP58557 167 aaPredicted RBP14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 MRNIPQ6NTE8 343 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 PAQR3Q6TCH7 311 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 CLEC14AQ86T13 490 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 TRIM74Q86UV6 250 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 TRIM73Q86UV7 250 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 SKA2Q8WVK7 121 aaPredicted RBP14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 SPATA17Q96L03 361 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 KCNA7Q96RP8 456 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 CCDC167Q9P0B6 97 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 BTRCQ9Y297 605 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 GREB1Q4ZG55 1949 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 DRGXA6NNA5 263 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 E5RI56 91 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 TBC1D4O60343 1298 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 CXCL14O95715 111 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 CNPP09543 421 aaKnown RBP14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 UQCRBP14927 111 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 SYN1P17600 705 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 MC4RP32245 332 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 CDH4P55283 916 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 MRPS22P82650 360 aaKnown RBP14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 CYTH1Q15438 398 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 LRRC26Q2I0M4 334 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 PSAPL1Q6NUJ1 521 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 ACAD11Q709F0 780 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 BBS7Q8IWZ6 715 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 PIANPQ8IYJ0 282 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 CMTM8Q8IZV2 173 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 CLDN19Q8N6F1 224 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 CCDC97Q96F63 343 aaPredicted RBP14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 HIC2Q96JB3 615 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 FBRSL1Q9HCM7 1045 aaKnown RBP14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 SPG21Q9NZD8 308 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 CDH22Q9UJ99 828 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 IGLV3-10A0A075B6K4 115 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 A0A1B0GVM2 712 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 TCAF2A6NFQ2 919 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 CACNG3O60359 315 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 CLDN11O75508 207 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 COL6A1P12109 1028 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 FOLH1Q04609 750 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 RBM44Q6ZP01 1051 aaKnown RBP14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 LRRC49Q8IUZ0 686 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 ZNF366Q8N895 744 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 ARL10Q8N8L6 244 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 PTGR2Q8N8N7 351 aaPredicted RBP14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 FAM81AQ8TBF8 368 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 TRPC4APQ8TEL6 797 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 GPR21Q99679 349 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 NPAS2Q99743 824 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 CERS4Q9HA82 394 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 PAK6Q9NQU5 681 aaPredicted RBP14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 POLR3BQ9NW08 1133 aaPredicted RBP14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 CDYLQ9Y232 598 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 POMPQ9Y244 141 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 INSL5Q9Y5Q6 135 aa14.61□□□□□ -0.07
TRAFD1-201ENST00000257604 C2orf81A6NN90 581 aa14.6□□□□□ -0.07
TRAFD1-201ENST00000257604 A8MT66 165 aa14.6□□□□□ -0.07
TRAFD1-201ENST00000257604 TRIM24O15164 1050 aa14.6□□□□□ -0.07
TRAFD1-201ENST00000257604 HDAC3O15379 428 aa14.6□□□□□ -0.07
TRAFD1-201ENST00000257604 MAGEB3O15480 346 aa14.6□□□□□ -0.07
TRAFD1-201ENST00000257604 FKBP6O75344 327 aa14.6□□□□□ -0.07
TRAFD1-201ENST00000257604 NDST3O95803 873 aa14.6□□□□□ -0.07
TRAFD1-201ENST00000257604 GUCA1CO95843 209 aa14.6□□□□□ -0.07
TRAFD1-201ENST00000257604 UGT1A6P19224 532 aa14.6□□□□□ -0.07
TRAFD1-201ENST00000257604 UGT1A1P22309 533 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms