RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 SLC25A41Q8N5S1 370 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 PNPLA1Q8N8W4 532 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 FAM71DQ8N9W8 422 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 IPMKQ8NFU5 416 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 CCDC110Q8TBZ0 833 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 CCHCR1Q8TD31 782 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 LMX1AQ8TE12 382 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 C1orf54Q8WWF1 131 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 ATG4AQ8WYN0 398 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 TSACCQ96A04 125 aaPredicted RBP8.5□□□□□ -1.05
TMEM258-201ENST00000257262 AP2M1Q96CW1 435 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 CNDP2Q96KP4 475 aaKnown RBP8.5□□□□□ -1.05
TMEM258-201ENST00000257262 WDR92Q96MX6 357 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 SPATA13Q96N96 652 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 CNTNAP3BQ96NU0 1288 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 WDR24Q96S15 920 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 AGAP2Q99490 1192 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 CDC6Q99741 560 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 TMEM121Q9BTD3 319 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 TEX101Q9BY14 249 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 CNTNAP3Q9BZ76 1288 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 GBA3Q9H227 469 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 ZFYVE1Q9HBF4 777 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 MAGEE1Q9HCI5 957 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 TRMT1Q9NXH9 659 aaKnown RBP8.5□□□□□ -1.05
TMEM258-201ENST00000257262 GOLGA6AQ9NYA3 693 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 APOBEC3BQ9UH17 382 aaKnown RBP8.5□□□□□ -1.05
TMEM258-201ENST00000257262 SHOC2Q9UQ13 582 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 SPO11Q9Y5K1 396 aa8.5□□□□□ -1.05
TMEM258-201ENST00000257262 ASCC3Q8N3C0 2202 aaKnown RBP8.5□□□□□ -1.05
TMEM258-201ENST00000257262 NEMP2A6NFY4 417 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 H3BM21 787 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 TRIM38O00635 465 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 AURKAO14965 403 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 SCAMP1O15126 338 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 FFAR2O15552 330 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 AQP9O43315 295 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 TNFSF14O43557 240 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 SIGLEC6O43699 453 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 LIASO43766 372 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 GCATO75600 419 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 ANXA9O76027 345 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 RASGRP1O95267 797 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 METTL18O95568 372 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 TOP3BO95985 862 aaKnown RBP8.49□□□□□ -1.05
TMEM258-201ENST00000257262 SOD1P00441 154 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 TNFP01375 233 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 FTH1P19P0C7X4 201 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 PSMB4P28070 264 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 GPR1P46091 355 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 SPINT3P49223 89 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 HK3P52790 923 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 GEMP55040 296 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 KIAA1024LP59773 190 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 SRP54P61011 504 aaKnown RBP8.49□□□□□ -1.05
TMEM258-201ENST00000257262 FOXC1Q12948 553 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 DNAJC3Q13217 504 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 SNX1Q13596 522 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 PRPSAP1Q14558 356 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 SIX1Q15475 284 aaPredicted RBP8.49□□□□□ -1.05
TMEM258-201ENST00000257262 SLC1A5Q15758 541 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 PARP6Q2NL67 630 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 ALG11Q2TAA5 492 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 PRRT3Q5FWE3 981 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 ZNF569Q5MCW4 686 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 RAET1GQ6H3X3 334 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 ZNF765Q7L2R6 523 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 SLCO6A1Q86UG4 719 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 HEATR4Q86WZ0 1026 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 HID1Q8IV36 788 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 RAVER1Q8IY67 606 aaKnown RBP8.49□□□□□ -1.05
TMEM258-201ENST00000257262 PHACTR4Q8IZ21 702 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 NRSN1Q8IZ57 195 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 GPR26Q8NDV2 337 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 ZNF548Q8NEK5 533 aaPredicted RBP8.49□□□□□ -1.05
TMEM258-201ENST00000257262 OR56A4Q8NGH8 313 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 OR4C6Q8NH72 309 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 ATL2Q8NHH9 583 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 RIOK2Q9BVS4 552 aaKnown RBP8.49□□□□□ -1.05
TMEM258-201ENST00000257262 GPR63Q9BZJ6 419 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 SLC13A1Q9BZW2 595 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 CLPBQ9H078 707 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 FAM83DQ9H4H8 585 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 WDR26Q9H7D7 661 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 MRPL40Q9NQ50 206 aaKnown RBP8.49□□□□□ -1.05
TMEM258-201ENST00000257262 TOR4AQ9NXH8 423 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 PKD2L2Q9NZM6 624 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 SPASTQ9UBP0 616 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 KLQ9UEF7 1012 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 FTSJ1Q9UET6 329 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 MOSPD1Q9UJG1 213 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 ZNF148Q9UQR1 794 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 AAR2Q9Y312 384 aaKnown RBP8.49□□□□□ -1.05
TMEM258-201ENST00000257262 ZNF711Q9Y462 761 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 JRKLQ9Y4A0 524 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 CSNK1G3Q9Y6M4 447 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 CEP250Q9BV73 2442 aa8.49□□□□□ -1.05
TMEM258-201ENST00000257262 SCN8AQ9UQD0 1980 aa8.48□□□□□ -1.05
TMEM258-201ENST00000257262 RGSL1A5PLK6 1076 aa8.48□□□□□ -1.05
TMEM258-201ENST00000257262 USP27XA6NNY8 438 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms