RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 EPB41L1Q9H4G0 881 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 ZDHHC3Q9NYG2 299 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 SORCS3Q9UPU3 1222 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 AKAP8O43823 692 aaKnown RBP13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 AGR2O95994 175 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 KRT8P05787 483 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 DNAJB1P25685 340 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 NFYCQ13952 458 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 ECM1Q16610 540 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 C11orf88Q6PI97 169 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 ENPP7Q6UWV6 458 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 SLC30A8Q8IWU4 369 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 PEX5LQ8IYB4 626 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 KXD1Q9BQD3 176 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 HMGXB4Q9UGU5 601 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 CHD4Q14839 1912 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 GTPBP1O00178 669 aaKnown RBP13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 FSCN2O14926 492 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 ADAMTS4O75173 837 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 CPSF4O95639 269 aaKnown RBP13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 HGFP14210 728 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 CTPS1P17812 591 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 MC1RQ01726 317 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 ELAVL3Q14576 367 aaKnown RBP13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 DPYSL2Q16555 572 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 PTCRAQ6ISU1 281 aaPredicted RBP13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 MSANTD2Q6P1R3 559 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 C15orf39Q6ZRI6 1047 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 COL26A1Q96A83 441 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 FCRL5Q96RD9 977 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 CAPN10Q9HC96 672 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 THAP1Q9NVV9 213 aa13.39□□□□□ -0.27
PRPF38A-201ENST00000257181 PITRM1Q5JRX3 1037 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 FAM151BQ6UXP7 276 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 SNX32Q86XE0 403 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 ARID3BQ8IVW6 561 aaPredicted RBP13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 CFAP52Q8N1V2 620 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 HMCESQ96FZ2 354 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 P2RY11Q96G91 374 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 ANKHQ9HCJ1 492 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 MID1IP1Q9NPA3 183 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 COL18A1P39060 1754 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 TK2O00142 265 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 SERPINB7O75635 380 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 KAT7O95251 611 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 TPH1P17752 444 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 GGCXP38435 758 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 ACTR3P61158 418 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 KCNC3Q14003 757 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 INO80DQ53TQ3 878 aaPredicted RBP13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 IRGCQ6NXR0 463 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 ANKRD54Q6NXT1 300 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 WDR93Q6P2C0 686 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 RSPO2Q6UXX9 243 aaPredicted RBP13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 PPP1R13LQ8WUF5 828 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 KAT2BQ92831 832 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 NELL1Q92832 810 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 TELO2Q9Y4R8 837 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 NUP98P52948 1817 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 AGPSO00116 658 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 KHNYNO15037 678 aaKnown RBP13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 AXIN1O15169 862 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 TEX28O15482 410 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 ENO1P06733 434 aaKnown RBP13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 SERINC3Q13530 473 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 TDGQ13569 410 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 MRPL43Q8N983 215 aaKnown RBP13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 OR52K1Q8NGK4 314 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 ATOH1Q92858 354 aaPredicted RBP13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 TTYH1Q9H313 450 aaPredicted RBP13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 SMURF2Q9HAU4 748 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 ETNK1Q9HBU6 452 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 EDARQ9UNE0 448 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 DNAJC16Q9Y2G8 782 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 WWP2O00308 870 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 LRIG2O94898 1065 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 CDK4P11802 303 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 LBPP18428 481 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 SHMT2P34897 504 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 COPAP53621 1224 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 BIKQ13323 160 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 GRM2Q14416 872 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 SLC1A5Q15758 541 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 PAOXQ6QHF9 649 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 RNF19BQ6ZMZ0 732 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 ATG4AQ8WYN0 398 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 CPXM1Q96SM3 734 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 KCNH6Q9H252 994 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 RHOJQ9H4E5 214 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 PRDM8Q9NQV8 689 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 DCTN4Q9UJW0 460 aa13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 USP15Q9Y4E8 981 aaPredicted RBP13.38□□□□□ -0.27
PRPF38A-201ENST00000257181 FAM214AQ32MH5 1076 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 PMF1Q6P1K2 205 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 PEX13Q92968 403 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 ZNF607Q96SK3 696 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 CARS2Q9HA77 564 aaKnown RBP13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 FBXO5Q9UKT4 447 aa13.37□□□□□ -0.27
PRPF38A-201ENST00000257181 GPR89AB7ZAQ6 455 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms