RNA–Protein interactions for RNA: ENST00000255320.6

HMGB1P5-201, Transcript of high mobility group box 1 pseudogene 5, humanhuman

BASIC

Gene HMGB1P5, Length 642 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P5-201ENST00000255320 NDST4Q9H3R1 872 aa4.37□□□□□ -1.71
HMGB1P5-201ENST00000255320 PIGMQ9H3S5 423 aa4.37□□□□□ -1.71
HMGB1P5-201ENST00000255320 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.37□□□□□ -1.71
HMGB1P5-201ENST00000255320 MARCH4Q9P2E8 410 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P5-201ENST00000255320 SLC9A2Q9UBY0 812 aa4.37□□□□□ -1.71
HMGB1P5-201ENST00000255320 GIMAP2Q9UG22 337 aa4.37□□□□□ -1.71
HMGB1P5-201ENST00000255320 FBXW11Q9UKB1 542 aa4.37□□□□□ -1.71
HMGB1P5-201ENST00000255320 EXO1Q9UQ84 846 aaKnown RBP4.37□□□□□ -1.71
HMGB1P5-201ENST00000255320 CKAP5Q14008 2032 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 LNP1A1A4G5 178 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 DKC1O60832 514 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 ICAM1P05362 532 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 MMP9P14780 707 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 TRIM21P19474 475 aaKnown RBP4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 TBXAS1P24557 533 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 SUOXP51687 545 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 GPR143P51810 404 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 C21orf58P58505 322 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 ECT2LQ008S8 904 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 CXCL9Q07325 125 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 SPOCK1Q08629 439 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 NEDD9Q14511 834 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 TMEM266Q2M3C6 531 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 PRTGQ2VWP7 1150 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 PPP6R3Q5H9R7 873 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 GGNBP1Q5YKI7 109 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 Q6ZTK2 550 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 DNAAF5Q86Y56 855 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 SCYL3Q8IZE3 742 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 NRACQ8N912 160 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 RPL36ALQ969Q0 106 aaKnown RBP4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 GCNAQ96QF7 691 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 SLITRK6Q9H5Y7 841 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 ACSS1Q9NUB1 689 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 COPG2Q9UBF2 871 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 RCOR1Q9UKL0 485 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 CDC14AQ9UNH5 594 aa4.36□□□□□ -1.71
HMGB1P5-201ENST00000255320 LOC102723996A0A087X1L8 192 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 IGHV4-28A0A0C4DH34 117 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 HSPA12AO43301 675 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 RGS14O43566 566 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 ITM2AO43736 263 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 CYP1A2P05177 515 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 DDX5P17844 614 aaKnown RBP4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 UBA1P22314 1058 aaKnown RBP4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 PRCPP42785 496 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 STAT2P52630 851 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 PPP5CP53041 499 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 RAD23BP54727 409 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 RRP1P56182 461 aaKnown RBP4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 PPATQ06203 517 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 SREBF2Q12772 1141 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 TNFAIP1Q13829 316 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 BAATQ14032 418 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 PNLIPRP3Q17RR3 467 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 CCDC96Q2M329 555 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 FAM133BQ5BKY9 247 aaKnown RBP4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 ZNF805Q5CZA5 627 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 KRT79Q5XKE5 535 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 CACNA2D4Q7Z3S7 1137 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 MRPL10Q7Z7H8 261 aaKnown RBP4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 SDCCAG8Q86SQ7 713 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 OR8K5Q8NH50 307 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 DENND1AQ8TEH3 1009 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 DUSP19Q8WTR2 217 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 GRAMD2BQ96HH9 432 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 RADILQ96JH8 1075 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 CEP295NLQ96MC4 621 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 KIFC3Q9BVG8 833 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 APOL6Q9BWW8 343 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 AP1M1Q9BXS5 423 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 KLHL4Q9C0H6 718 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 FOXP1Q9H334 677 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 SEBOXQ9HB31 216 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 CPSF2Q9P2I0 782 aaKnown RBP4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 TINAGQ9UJW2 476 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 PLAGL1Q9UM63 463 aa4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 ZNF644Q9H582 1327 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P5-201ENST00000255320 A0A1B0GVM2 712 aa4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 MAP2K7O14733 419 aa4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 SPRY3O43610 288 aa4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 PLRG1O43660 514 aaKnown RBP4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 ZIC3O60481 467 aa4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 DDNO94850 711 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 VNN2O95498 520 aa4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 SYF2O95926 243 aaKnown RBP4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 TOMM40O96008 361 aa4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 HIST1H2ABP04908 130 aa4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 PSG1P11464 419 aa4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 NAGAP17050 411 aa4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 HIST1H2ADP20671 130 aa4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 RFX2P48378 723 aa4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 ENTPD1P49961 510 aa4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 MXI1P50539 228 aa4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 CDC16Q13042 620 aa4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 GPS2Q13227 327 aa4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 GRAPQ13588 217 aa4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 KCNC3Q14003 757 aa4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 DLG2Q15700 870 aa4.34□□□□□ -1.71
HMGB1P5-201ENST00000255320 KYNUQ16719 465 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms