RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 DHX15O43143 795 aaKnown RBP18.93■□□□□ 0.62
PTPRE-201ENST00000254667 POP4O95707 220 aaKnown RBP18.93■□□□□ 0.62
PTPRE-201ENST00000254667 TRAF3Q13114 568 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 NEK5Q6P3R8 708 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 PHF10Q8WUB8 498 aaKnown RBP18.93■□□□□ 0.62
PTPRE-201ENST00000254667 NDRG1Q92597 394 aaKnown RBP18.93■□□□□ 0.62
PTPRE-201ENST00000254667 TMEM109Q9BVC6 243 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 PLK2Q9NYY3 685 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 SLC17A7Q9P2U7 560 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 FBXW11Q9UKB1 542 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 RAB23Q9ULC3 237 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 ERVW-1Q9UQF0 538 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 EFCAB10A6NFE3 127 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 CCNA2P20248 432 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 COX10Q12887 443 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 SLC44A4Q53GD3 710 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 ADGRD1Q6QNK2 874 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.93■□□□□ 0.62
PTPRE-201ENST00000254667 SLC4A5Q9BY07 1137 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 HDHD2Q9H0R4 259 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 C3orf14Q9HBI5 128 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 SSU72Q9NP77 194 aaKnown RBP18.93■□□□□ 0.62
PTPRE-201ENST00000254667 GTF2IRD1Q9UHL9 959 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 FZD10Q9ULW2 581 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 LYPLA1O75608 230 aaPredicted RBP18.93■□□□□ 0.62
PTPRE-201ENST00000254667 CAPN15O75808 1086 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 INHAP05111 366 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 ZNF24P17028 368 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 IDH2P48735 452 aaKnown RBP18.93■□□□□ 0.62
PTPRE-201ENST00000254667 LIMK2P53671 638 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 PTPRJQ12913 1337 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 TTC27Q6P3X3 843 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 COMMD2Q86X83 199 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 SLCO1B3Q9NPD5 702 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 KLHL1Q9NR64 748 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 CDK14O94921 469 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 SLC9A5Q14940 896 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 MRPS26Q9BYN8 205 aaKnown RBP18.93■□□□□ 0.62
PTPRE-201ENST00000254667 PRDM8Q9NQV8 689 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 PNPOQ9NVS9 261 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 ATP6V1HQ9UI12 483 aa18.93■□□□□ 0.62
PTPRE-201ENST00000254667 ZFP37Q9Y6Q3 630 aaPredicted RBP18.93■□□□□ 0.62
PTPRE-201ENST00000254667 LINC00854A0A1B0GVQ3 168 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 H0Y858 1186 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 AP3D1O14617 1153 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 INSIG1O15503 277 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 ASPAP45381 313 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 GNPDA1P46926 289 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 ARMC8Q8IUR7 673 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 ZNF567Q8N184 647 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 FEM1CQ96JP0 617 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 TCF12Q99081 682 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 CHRAC1Q9NRG0 131 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 GMPPBQ9Y5P6 360 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 ERAL1O75616 437 aaKnown RBP18.92■□□□□ 0.62
PTPRE-201ENST00000254667 ZMPSTE24O75844 475 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 PIAS1O75925 651 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 IDSP22304 550 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 HNF4AP41235 474 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 CDH13P55290 713 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 C21orf59P57076 290 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 PTSQ03393 145 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 RFTN2Q52LD8 501 aaPredicted RBP18.92■□□□□ 0.62
PTPRE-201ENST00000254667 SPANXN2Q5MJ10 180 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 RSBN1Q5VWQ0 802 aaPredicted RBP18.92■□□□□ 0.62
PTPRE-201ENST00000254667 RFWD3Q6PCD5 774 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 GET4Q7L5D6 327 aaPredicted RBP18.92■□□□□ 0.62
PTPRE-201ENST00000254667 REXO5Q96IC2 774 aaKnown RBP18.92■□□□□ 0.62
PTPRE-201ENST00000254667 MECRQ9BV79 373 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 C6orf62Q9GZU0 229 aaPredicted RBP18.92■□□□□ 0.62
PTPRE-201ENST00000254667 NEK6Q9HC98 313 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 LMO7Q8WWI1 1683 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 ERN1O75460 977 aaKnown RBP18.92■□□□□ 0.62
PTPRE-201ENST00000254667 DSC2Q02487 901 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 NPY5RQ15761 445 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 NRF1Q16656 503 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 MYDGFQ969H8 173 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 C7orf26Q96N11 449 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 VPS35Q96QK1 796 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 FAM83DQ9H4H8 585 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 SEMA3GQ9NS98 782 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 POLR3HQ9Y535 204 aaPredicted RBP18.92■□□□□ 0.62
PTPRE-201ENST00000254667 MYBPHLA2RUH7 354 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 FZD9O00144 591 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 SCNN1AP37088 669 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 CHN2P52757 468 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 ABRAXAS1Q6UWZ7 409 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 PPP1R14AQ96A00 147 aa18.92■□□□□ 0.62
PTPRE-201ENST00000254667 ATP6AP2A0A1C7CYW4 349 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 DHRS12A0PJE2 317 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 SLC38A8A6NNN8 435 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 ATP6AP2O75787 350 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 CHRNB2P17787 502 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 ASMTP46597 345 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 UGT2B15P54855 530 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 SPESP1Q6UW49 350 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 KLHL23Q8NBE8 558 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 SRFBP1Q8NEF9 429 aaKnown RBP18.91■□□□□ 0.62
PTPRE-201ENST00000254667 FANCEQ9HB96 536 aa18.91■□□□□ 0.62
PTPRE-201ENST00000254667 SGK2Q9HBY8 427 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms