RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 FEM1AQ9BSK4 669 aa21.62■■□□□ 1.05
CLN6-201ENST00000249806 IKZF3Q9UKT9 509 aa21.62■■□□□ 1.05
CLN6-201ENST00000249806 FCF1Q9Y324 198 aaKnown RBP21.62■■□□□ 1.05
CLN6-201ENST00000249806 OR1I1O60431 355 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 HOXB8P17481 243 aaPredicted RBP21.61■■□□□ 1.05
CLN6-201ENST00000249806 SH3BP2P78314 561 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 DEFB103AP81534 67 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 NFKB2Q00653 900 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 ZRSR2Q15696 482 aaKnown RBP21.61■■□□□ 1.05
CLN6-201ENST00000249806 CMPK2Q5EBM0 449 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 C16orf89Q6UX73 402 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 GK5Q6ZS86 529 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 CHSY3Q70JA7 882 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 HMGCLL1Q8TB92 370 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 ATOH8Q96SQ7 321 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 ADGRE3Q9BY15 652 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 POPDC3Q9HBV1 291 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 STOML2Q9UJZ1 356 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 VPS28Q9UK41 221 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 PENKP01210 267 aaPredicted RBP21.61■■□□□ 1.05
CLN6-201ENST00000249806 CES1P23141 567 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 MC4RP32245 332 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 DPP6P42658 865 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 FBXO48Q5FWF7 155 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 AFAP1L2Q8N4X5 818 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 ZNF689Q96CS4 500 aaPredicted RBP21.61■■□□□ 1.05
CLN6-201ENST00000249806 BIRC8Q96P09 236 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 DDX50Q9BQ39 737 aaKnown RBP21.61■■□□□ 1.05
CLN6-201ENST00000249806 TRMOQ9BU70 441 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 CCDC68Q9H2F9 335 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 TAS2R13Q9NYV9 303 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 GBF1Q92538 1859 aa21.61■■□□□ 1.05
CLN6-201ENST00000249806 STX16-NPEPL1H3BU86 382 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 GREM1O60565 184 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 PKNOX1P55347 436 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 ART3Q13508 389 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 HERC3Q15034 1050 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 PTPRNQ16849 979 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 ATXN7L2Q5T6C5 722 aaPredicted RBP21.6■■□□□ 1.05
CLN6-201ENST00000249806 NCEH1Q6PIU2 408 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 RNF148Q8N7C7 305 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 SNX31Q8N9S9 440 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 USP13Q92995 863 aaPredicted RBP21.6■■□□□ 1.05
CLN6-201ENST00000249806 TMA16Q96EY4 203 aaKnown RBP21.6■■□□□ 1.05
CLN6-201ENST00000249806 NSUN5Q96P11 429 aaKnown RBP21.6■■□□□ 1.05
CLN6-201ENST00000249806 GPR21Q99679 349 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 SLC30A3Q99726 388 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 EFCAB1Q9HAE3 211 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 LHX3Q9UBR4 397 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 ATP11BQ9Y2G3 1177 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 INSL5Q9Y5Q6 135 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 K7ERQ8 282 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 UBDO15205 165 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 GPR39O43194 453 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 LUC7L3O95232 432 aaKnown RBP21.6■■□□□ 1.05
CLN6-201ENST00000249806 PRAMEF12O95522 483 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 URODP06132 367 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 HDCP19113 662 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 PPP3CCP48454 512 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 THOP1P52888 689 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 EPHB3P54753 998 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 RHEBL1Q8TAI7 183 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 C3orf30Q96M34 536 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 ZNF184Q99676 751 aaPredicted RBP21.6■■□□□ 1.05
CLN6-201ENST00000249806 TFB2MQ9H5Q4 396 aaKnown RBP21.6■■□□□ 1.05
CLN6-201ENST00000249806 WDR41Q9HAD4 459 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 PCDHB9Q9Y5E1 797 aa21.6■■□□□ 1.05
CLN6-201ENST00000249806 CSKP41240 450 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 INHBCP55103 352 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 UGT3A2Q3SY77 523 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 TOX2Q96NM4 488 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 SYTL2Q9HCH5 934 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 STK39Q9UEW8 545 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 VPS51Q9UID3 782 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 TBX21Q9UL17 535 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 PRPF19Q9UMS4 504 aaKnown RBP21.59■■□□□ 1.05
CLN6-201ENST00000249806 OR51B4Q9Y5P0 310 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 CPQQ9Y646 472 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 PLXNA4Q9HCM2 1894 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 STX7O15400 261 aaKnown RBP21.59■■□□□ 1.05
CLN6-201ENST00000249806 CDK14O94921 469 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 BMP1P13497 986 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 GFAPP14136 432 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 PSMA3P25788 255 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 ILF2Q12905 390 aaKnown RBP21.59■■□□□ 1.05
CLN6-201ENST00000249806 LRRC36Q1X8D7 754 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 ZRANB3Q5FWF4 1079 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 BNC2Q6ZN30 1099 aaPredicted RBP21.59■■□□□ 1.05
CLN6-201ENST00000249806 TCEAL8Q8IYN2 117 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 DIS3LQ8TF46 1054 aaKnown RBP21.59■■□□□ 1.05
CLN6-201ENST00000249806 JADE3Q92613 823 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 TCF12Q99081 682 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 HERC2P3Q9BVR0 1158 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 IL21Q9HBE4 155 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 FBRSL1Q9HCM7 1045 aaKnown RBP21.59■■□□□ 1.05
CLN6-201ENST00000249806 MID1IP1Q9NPA3 183 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 BATF3Q9NR55 127 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 TMEM39AQ9NV64 488 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 CCDC167Q9P0B6 97 aa21.59■■□□□ 1.05
CLN6-201ENST00000249806 ADAMTS6Q9UKP5 1117 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms