RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 LPGAT1Q92604 370 aa19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 TFB2MQ9H5Q4 396 aaKnown RBP19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 SPATS2LQ9NUQ6 558 aaKnown RBP19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 INTS10Q9NVR2 710 aaKnown RBP19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 SUCOQ9UBS9 1254 aaKnown RBP19.49■□□□□ 0.71
CDC42EP1-201ENST00000249014 A0A1B0GTL3 188 aa19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 ENO4A6NNW6 628 aa19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 ARVCFO00192 962 aa19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 INSIG1O15503 277 aa19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 NRP2O60462 931 aa19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 CRTAMO95727 393 aa19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 SLC11A2P49281 568 aa19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 OXCT1P55809 520 aa19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 RPL26P61254 145 aaKnown RBP19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 GRM2Q14416 872 aa19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 LAYNQ6UX15 382 aa19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 GLT6D1Q7Z4J2 308 aa19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 FBXO22Q8NEZ5 403 aa19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 C2orf15Q8WU43 125 aaKnown RBP19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 ZNF512Q96ME7 567 aaPredicted RBP19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 TRAPPC9Q96Q05 1148 aa19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 KCNA7Q96RP8 456 aa19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 SLC25A23Q9BV35 468 aa19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 NACA2Q9H009 215 aa19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 LRFN2Q9ULH4 789 aa19.48■□□□□ 0.71
CDC42EP1-201ENST00000249014 MRASO14807 208 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 COCHO43405 550 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 RNASEH2AO75792 299 aaKnown RBP19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 RHOBTB1O94844 696 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 FGF4P08620 206 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 GPX3P22352 226 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 ILF2Q12905 390 aaKnown RBP19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 FBXO48Q5FWF7 155 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 C8orf82Q6P1X6 216 aaPredicted RBP19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 UGT2A3Q6UWM9 527 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 CRIPAKQ8N1N5 446 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 TWIST2Q8WVJ9 160 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 ATP6V1E2Q96A05 226 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 TSC22D3Q99576 134 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 TDRD1Q9BXT4 1180 aaKnown RBP19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 GKN1Q9NS71 199 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 GALPQ9UBC7 116 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 ZNF840PA6NDX5 716 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 PIP5K1BO14986 540 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 AOC2O75106 756 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 GFAPP14136 432 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 ATP4BP51164 291 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 ELAVL2Q12926 359 aaKnown RBP19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 CYTH1Q15438 398 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 TAF1AQ15573 450 aaPredicted RBP19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 IL23RQ5VWK5 629 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 RAB44Q7Z6P3 723 aaPredicted RBP19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 TMEM102Q8N9M5 508 aaPredicted RBP19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 CD99L2Q8TCZ2 262 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 TRPC4APQ8TEL6 797 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 KIAA1191Q96A73 305 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 GBP5Q96PP8 586 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 SLC39A3Q9BRY0 314 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 TUBB1Q9H4B7 451 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 SPAG4Q9NPE6 437 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 CD300AQ9UGN4 299 aa19.47■□□□□ 0.71
CDC42EP1-201ENST00000249014 TBKBP1A7MCY6 615 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 AZIN1O14977 448 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 DNAJA2O60884 412 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 CLASP2O75122 1294 aaKnown RBP19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 CAPNS1P04632 268 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 ACADVLP49748 655 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 NME5P56597 212 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 GRB7Q14451 532 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 PTPRRQ15256 657 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 GEN1Q17RS7 908 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 KANK2Q63ZY3 851 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 AFTPHQ6ULP2 937 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 NPAS4Q8IUM7 802 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 PHYKPLQ8IUZ5 450 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 ASB2Q96Q27 587 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 CDK5RAP1Q96SZ6 601 aaKnown RBP19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 DERL2Q9GZP9 239 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 SCUBE2Q9NQ36 999 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 PCDHGC4Q9Y5F7 938 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 SCN5AQ14524 2016 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 CBX4O00257 560 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 DENRO43583 198 aaKnown RBP19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 KERAO60938 352 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 SRP72O76094 671 aaKnown RBP19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 GRIA2P42262 883 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 RETREG3Q86VR2 466 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 LPCAT1Q8NF37 534 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 ADCY4Q8NFM4 1077 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 WBP2Q969T9 261 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 SLC30A3Q99726 388 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 FAM192AQ9GZU8 254 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 TAS2R13Q9NYV9 303 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 TMEM181Q9P2C4 612 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 EPS15L1Q9UBC2 864 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 TBC1D30Q9Y2I9 924 aa19.46■□□□□ 0.71
CDC42EP1-201ENST00000249014 ANKRD12Q6UB98 2062 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 SUPT3HB4E1H0 165 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 SUPT3HO75486 399 aa19.45■□□□□ 0.7
CDC42EP1-201ENST00000249014 CLDN11O75508 207 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms