RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 PKDCCQ504Y2 493 aa14.15□□□□□ -0.14
PCDHB3-201ENST00000231130 PPP4R4Q6NUP7 873 aa14.15□□□□□ -0.14
PCDHB3-201ENST00000231130 FAM117BQ6P1L5 589 aa14.15□□□□□ -0.14
PCDHB3-201ENST00000231130 ELMOD2Q8IZ81 293 aa14.15□□□□□ -0.14
PCDHB3-201ENST00000231130 OR6P1Q8NGX9 317 aa14.15□□□□□ -0.14
PCDHB3-201ENST00000231130 HDAC10Q969S8 669 aa14.15□□□□□ -0.14
PCDHB3-201ENST00000231130 VPS33AQ96AX1 596 aa14.15□□□□□ -0.14
PCDHB3-201ENST00000231130 C3orf30Q96M34 536 aa14.15□□□□□ -0.14
PCDHB3-201ENST00000231130 DEPDC7Q96QD5 511 aa14.15□□□□□ -0.14
PCDHB3-201ENST00000231130 SLC25A23Q9BV35 468 aa14.15□□□□□ -0.14
PCDHB3-201ENST00000231130 PTBP2Q9UKA9 531 aaKnown RBP14.15□□□□□ -0.14
PCDHB3-201ENST00000231130 USP22Q9UPT9 525 aa14.15□□□□□ -0.14
PCDHB3-201ENST00000231130 CAB39Q9Y376 341 aaPredicted RBP14.15□□□□□ -0.14
PCDHB3-201ENST00000231130 UGT2A1Q9Y4X1 527 aa14.15□□□□□ -0.14
PCDHB3-201ENST00000231130 ANGPTL3Q9Y5C1 460 aa14.15□□□□□ -0.14
PCDHB3-201ENST00000231130 TIMM13Q9Y5L4 95 aaPredicted RBP14.15□□□□□ -0.14
PCDHB3-201ENST00000231130 LRRC14BA6NHZ5 514 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 NME4O00746 187 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 JRKO75564 520 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 IFITM3Q01628 133 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 GPR162Q16538 588 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 RABL3Q5HYI8 236 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 MICALL2Q8IY33 904 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 AFAP1L2Q8N4X5 818 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 OR52K2Q8NGK3 314 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 RAB2BQ8WUD1 216 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 WDR12Q9GZL7 423 aaKnown RBP14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 LHPPQ9H008 270 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 LTB4R2Q9NPC1 389 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 MAGED1Q9Y5V3 778 aaPredicted RBP14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 SIX3O95343 332 aaPredicted RBP14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 CYP2B6P20813 491 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 POLR2IP36954 125 aaKnown RBP14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 ITKQ08881 620 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 VAC14Q08AM6 782 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 TRIM32Q13049 653 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 SQLEQ14534 574 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 HERC3Q15034 1050 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 PLEKHG7Q6ZR37 379 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 ERMP1Q7Z2K6 904 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 ADAMTS16Q8TE57 1224 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 SLC10A4Q96EP9 437 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 KCNA7Q96RP8 456 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 CASS4Q9NQ75 786 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 PNMA8BQ9ULN7 279 aaPredicted RBP14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 B3GNT3Q9Y2A9 372 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 TCRBV3S1A0A5B6 114 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 TRIM24O15164 1050 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 INPP5AQ14642 412 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 SNAP47Q5SQN1 464 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 SIGIRRQ6IA17 410 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 PIWIL4Q7Z3Z4 852 aaKnown RBP14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 SFRP1Q8N474 314 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 DNERQ8NFT8 737 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 RNF145Q96MT1 663 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 MAGEE1Q9HCI5 957 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 MRPL40Q9NQ50 206 aaKnown RBP14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 NUDT5Q9UKK9 219 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 CRYL1Q9Y2S2 319 aa14.14□□□□□ -0.15
PCDHB3-201ENST00000231130 COL2A1P02458 1487 aaPredicted RBP14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 ZNF638Q14966 1978 aaKnown RBP14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 TBX1O43435 398 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 TSPAN9O75954 239 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 ALBP02768 609 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 YBX3P16989 372 aaKnown RBP eCLIP14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 RFTN1Q14699 578 aaPredicted RBP14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 TMEM236Q5W0B7 351 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 TTC23LQ6PF05 361 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 PDZD4Q76G19 769 aaPredicted RBP14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 ARMC8Q8IUR7 673 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 REM2Q8IYK8 340 aaPredicted RBP14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 NATD1Q8N6N6 113 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 ATP6V0D2Q8N8Y2 350 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 DCBLD1Q8N8Z6 715 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 CENPIQ92674 756 aaPredicted RBP14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 TUBGCP3Q96CW5 907 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 TMEM74Q96NL1 305 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 FSD1LQ9BXM9 530 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 ATP13A3Q9H7F0 1226 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 STAP1Q9ULZ2 295 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 PCDHGA11Q9Y5H2 935 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 A8MT66 165 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 ATP5F1P24539 256 aaPredicted RBP14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 TKTL1P51854 596 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 DGCR6Q14129 220 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 PAGE2Q7Z2X7 111 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 LGI2Q8N0V4 545 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 AGBL3Q8NEM8 1001 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 PCP4L1A6NKN8 68 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 I6L893 689 aaPredicted RBP14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 LINC00032P0C843 101 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 KCNC4Q03721 635 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 BROXQ5VW32 411 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 NAPEPLDQ6IQ20 393 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 STRADAQ7RTN6 431 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 HOXD1Q9GZZ0 328 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 TMEM9Q9P0T7 183 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 BAG5Q9UL15 447 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 ANKRD6Q9Y2G4 727 aa14.13□□□□□ -0.15
PCDHB3-201ENST00000231130 SNX5Q9Y5X3 404 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms