RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 ATP5C1P36542 298 aaKnown RBP21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 OXCT1P55809 520 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 SH3BGRP55822 239 aaPredicted RBP21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 FUT10Q6P4F1 479 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 ANKS3Q6ZW76 656 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 PDZD8Q8NEN9 1154 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 LPGAT1Q92604 370 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 PBXIP1Q96AQ6 731 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 CASD1Q96PB1 797 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 UHRF1Q96T88 793 aaPredicted RBP21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 TMEM175Q9BSA9 504 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 CCDC68Q9H2F9 335 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 DNAJC15Q9Y5T4 150 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 AP4B1Q9Y6B7 739 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 SYCE1LA8MT33 242 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 UBXN8O00124 270 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 CLDN11O75508 207 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 RNASEH2AO75792 299 aaKnown RBP21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 RHOBTB1O94844 696 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 MATN4O95460 622 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 ELNP15502 786 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 MRPL19P49406 292 aaKnown RBP21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 COQ5Q5HYK3 327 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 IL31Q6EBC2 164 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 MIER2Q8N344 545 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 RYBPQ8N488 228 aaPredicted RBP21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 NKAPQ8N5F7 415 aaKnown RBP21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 PNPLA1Q8N8W4 532 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 SPDYE1Q8NFV5 336 aaPredicted RBP21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 TSPEARQ8WU66 669 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 TWIST2Q8WVJ9 160 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 CRISPLD1Q9H336 500 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 PIDD1Q9HB75 910 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 NMRK2Q9NPI5 230 aa21.92■■□□□ 1.1
SMARCD2-201ENST00000225742 ILVBLA1L0T0 632 aa21.91■■□□□ 1.1
SMARCD2-201ENST00000225742 C2orf81A6NN90 581 aa21.91■■□□□ 1.1
SMARCD2-201ENST00000225742 INSIG1O15503 277 aa21.91■■□□□ 1.1
SMARCD2-201ENST00000225742 GJB3O75712 270 aa21.91■■□□□ 1.1
SMARCD2-201ENST00000225742 PYGLP06737 847 aa21.91■■□□□ 1.1
SMARCD2-201ENST00000225742 GFAPP14136 432 aa21.91■■□□□ 1.1
SMARCD2-201ENST00000225742 LBPP18428 481 aa21.91■■□□□ 1.1
SMARCD2-201ENST00000225742 TCN1P20061 433 aaPredicted RBP21.91■■□□□ 1.1
SMARCD2-201ENST00000225742 KCNQ1P51787 676 aa21.91■■□□□ 1.1
SMARCD2-201ENST00000225742 PTPRCAPQ14761 206 aa21.91■■□□□ 1.1
SMARCD2-201ENST00000225742 PFKFB4Q16877 469 aa21.91■■□□□ 1.1
SMARCD2-201ENST00000225742 IL23RQ5VWK5 629 aa21.91■■□□□ 1.1
SMARCD2-201ENST00000225742 KLHDC10Q6PID8 442 aa21.91■■□□□ 1.1
SMARCD2-201ENST00000225742 SH3RF2Q8TEC5 729 aa21.91■■□□□ 1.1
SMARCD2-201ENST00000225742 C3orf30Q96M34 536 aa21.91■■□□□ 1.1
SMARCD2-201ENST00000225742 C1QTNF3Q9BXJ4 246 aa21.91■■□□□ 1.1
SMARCD2-201ENST00000225742 NUSAP1Q9BXS6 441 aaKnown RBP21.91■■□□□ 1.1
SMARCD2-201ENST00000225742 H3BNC9 293 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 ENPP3O14638 875 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 STX16O14662 325 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 KIF3CO14782 793 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 NDUFS3O75489 264 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 ALDOCP09972 364 aaKnown RBP21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 CR2P20023 1033 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 SLC6A4P31645 630 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 SLC11A1P49279 550 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 GRIK2Q13002 908 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 LCP2Q13094 533 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 DUSP4Q13115 394 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 PABPC1LQ4VXU2 614 aaKnown RBP21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 CWF19L1Q69YN2 538 aaKnown RBP21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 TXNDC11Q6PKC3 985 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 CHST9Q7L1S5 443 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 FUNDC1Q8IVP5 155 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 FBXO39Q8N4B4 442 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 EXT2Q93063 718 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 TBRG4Q969Z0 631 aaKnown RBP eCLIP21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 ZUFSPQ96AP4 578 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 PLD4Q96BZ4 506 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 GPATCH1Q9BRR8 931 aaKnown RBP21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 ZNF696Q9H7X3 374 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 RNF112Q9ULX5 631 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 OAS3Q9Y6K5 1087 aaKnown RBP21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 ZFP37Q9Y6Q3 630 aaPredicted RBP21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 GBF1Q92538 1859 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 A0A0D9SEW6 157 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 PRORSD1PA6NEY8 169 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 H3BMM5 538 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 HOXA2O43364 376 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 TNFAIP8O95379 198 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 SELPP16109 830 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 TSPAN8P19075 237 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 CALRP27797 417 aaKnown RBP21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 CDH13P55290 713 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 FOXM1Q08050 763 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 KIF19Q2TAC6 998 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 CNPY1Q3B7I2 92 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 MAP7D1Q3KQU3 841 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 ANKS6Q68DC2 871 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 RSPO2Q6UXX9 243 aaPredicted RBP21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 LRRC8DQ7L1W4 858 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 SPATA19Q7Z5L4 167 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 PHYKPLQ8IUZ5 450 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 SPNS2Q8IVW8 549 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 CFAP52Q8N1V2 620 aa21.9■■□□□ 1.1
SMARCD2-201ENST00000225742 GOLM1Q8NBJ4 401 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms