RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 CXorf21Q9HAI6 301 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 NMUR1Q9HB89 426 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 SEMA4BQ9NPR2 832 aaPredicted RBP18.47■□□□□ 0.55
CACTIN-201ENST00000221899 POLG2Q9UHN1 485 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 TIMM22Q9Y584 194 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 WISP3O95389 354 aaPredicted RBP18.47■□□□□ 0.55
CACTIN-201ENST00000221899 POMCP01189 267 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 PLCL1Q15111 1095 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 SIRPB2Q5JXA9 342 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 PHYKPLQ8IUZ5 450 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 TNIP2Q8NFZ5 429 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 GABPB2Q8TAK5 448 aaPredicted RBP18.47■□□□□ 0.55
CACTIN-201ENST00000221899 C9orf16Q9BUW7 83 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 ZNF408Q9H9D4 720 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 VPS45Q9NRW7 570 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 UXTQ9UBK9 157 aaPredicted RBP18.47■□□□□ 0.55
CACTIN-201ENST00000221899 C17orf102A2RUQ5 167 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 MMP2P08253 660 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 PRSS56P0CW18 603 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 GRB14Q14449 540 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 ATP6AP1Q15904 470 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 ELMSAN1Q6PJG2 1045 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 SCIMPQ6UWF3 145 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 MINDY1Q8N5J2 469 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 MAGEE2Q8TD90 523 aaPredicted RBP18.47■□□□□ 0.55
CACTIN-201ENST00000221899 LZICQ8WZA0 190 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 ITFG2Q969R8 447 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 CENPNQ96H22 339 aaPredicted RBP18.47■□□□□ 0.55
CACTIN-201ENST00000221899 TEX37Q96LM6 180 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 MYRFLQ96LU7 910 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 PPP1R2P1Q96PQ5 205 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 AGO3Q9H9G7 860 aaKnown RBP18.47■□□□□ 0.55
CACTIN-201ENST00000221899 ARNT2Q9HBZ2 717 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 ACTR3BQ9P1U1 418 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 FADS3Q9Y5Q0 445 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 ARL5AQ9Y689 179 aa18.47■□□□□ 0.55
CACTIN-201ENST00000221899 SLC7A4O43246 635 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 HSD17B1P14061 328 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 VARSP26640 1264 aaKnown RBP18.46■□□□□ 0.55
CACTIN-201ENST00000221899 NFYCQ13952 458 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 SEMA3AQ14563 771 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 PIK3R6Q5UE93 754 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 MARC1Q5VT66 337 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 LCN8Q6JVE9 175 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 TMEM26Q6ZUK4 368 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 PACRGLQ8N7B6 248 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 BLOC1S5Q8TDH9 187 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 PSMG2Q969U7 264 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 FEM1CQ96JP0 617 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 TMEM74Q96NL1 305 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 SEPHS2Q99611 448 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 MFSD1Q9H3U5 465 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 POLR1BQ9H9Y6 1135 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 PLGRKTQ9HBL7 147 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 ATP13A1Q9HD20 1204 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 ABCC13Q9NSE7 274 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 ST3GAL5Q9UNP4 418 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 ACOX3O15254 700 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 CNTN5O94779 1100 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 SLC2A3P11169 496 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 MTHFD2P13995 350 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 LBPP18428 481 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 GRIK1P39086 918 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 TIAL1Q01085 375 aaKnown RBP eCLIP18.46■□□□□ 0.55
CACTIN-201ENST00000221899 NEDD8Q15843 81 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 SDHAF4Q5VUM1 108 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 AFMIDQ63HM1 303 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 LYSMD3Q7Z3D4 306 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 RAB44Q7Z6P3 723 aaPredicted RBP18.46■□□□□ 0.55
CACTIN-201ENST00000221899 SCD5Q86SK9 330 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 BBS5Q8N3I7 341 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 SMOC2Q9H3U7 446 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 SLAMF8Q9P0V8 285 aa18.46■□□□□ 0.55
CACTIN-201ENST00000221899 ANKRD12Q6UB98 2062 aa18.46■□□□□ 0.54
CACTIN-201ENST00000221899 A0A1W2PPW3 197 aa18.45■□□□□ 0.54
CACTIN-201ENST00000221899 F8W810 466 aa18.45■□□□□ 0.54
CACTIN-201ENST00000221899 GOT2P00505 430 aaKnown RBP18.45■□□□□ 0.54
CACTIN-201ENST00000221899 ODC1P11926 461 aa18.45■□□□□ 0.54
CACTIN-201ENST00000221899 GSK3BP49841 420 aa18.45■□□□□ 0.54
CACTIN-201ENST00000221899 BNIP2Q12982 314 aa18.45■□□□□ 0.54
CACTIN-201ENST00000221899 RAB39AQ14964 217 aa18.45■□□□□ 0.54
CACTIN-201ENST00000221899 UPP1Q16831 310 aa18.45■□□□□ 0.54
CACTIN-201ENST00000221899 KANK2Q63ZY3 851 aa18.45■□□□□ 0.54
CACTIN-201ENST00000221899 PRMT9Q6P2P2 845 aa18.45■□□□□ 0.54
CACTIN-201ENST00000221899 FAM171BQ6P995 826 aa18.45■□□□□ 0.54
CACTIN-201ENST00000221899 SP110Q9HB58 689 aa18.45■□□□□ 0.54
CACTIN-201ENST00000221899 GID8Q9NWU2 228 aa18.45■□□□□ 0.54
CACTIN-201ENST00000221899 TUBA8Q9NY65 449 aaPredicted RBP18.45■□□□□ 0.54
CACTIN-201ENST00000221899 HACD3Q9P035 362 aa18.45■□□□□ 0.54
CACTIN-201ENST00000221899 ZFC3H1O60293 1989 aaKnown RBP18.45■□□□□ 0.54
CACTIN-201ENST00000221899 A0A1W2PQH9 124 aa18.45■□□□□ 0.54
CACTIN-201ENST00000221899 MROH6A6NGR9 719 aa18.45■□□□□ 0.54
CACTIN-201ENST00000221899 NCF1BA6NI72 391 aaPredicted RBP18.45■□□□□ 0.54
CACTIN-201ENST00000221899 NCF1CA8MVU1 366 aaPredicted RBP18.45■□□□□ 0.54
CACTIN-201ENST00000221899 SUPT3HB4E1H0 165 aa18.45■□□□□ 0.54
CACTIN-201ENST00000221899 CLASP2O75122 1294 aaKnown RBP18.45■□□□□ 0.54
CACTIN-201ENST00000221899 SUPT3HO75486 399 aa18.45■□□□□ 0.54
CACTIN-201ENST00000221899 CRCPO75575 148 aa18.45■□□□□ 0.54
CACTIN-201ENST00000221899 OR4Q2P0C623 313 aa18.45■□□□□ 0.54
CACTIN-201ENST00000221899 NCF1P14598 390 aaPredicted RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms