RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Pdcd1Q02242 288 aa13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Mageb5Q14AN0 366 aa13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Trappc9Q3U0M1 1148 aa13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 MslnQ61468 625 aa13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Nrg1Q6DR99 700 aa13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 H2afy2Q8CCK0 372 aaKnown RBP13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Cyp2d26Q8CIM7 500 aa13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 LipmQ8K2A6 422 aa13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 D8Ertd738eQ8R1F0 94 aa13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Aim2Q91VJ1 354 aaKnown RBP13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Actr3Q99JY9 418 aaKnown RBP13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 CpqQ9WVJ3 470 aa13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Arih2Q9Z1K6 492 aa13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Ccdc120A2AEV7 629 aa13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 AgxtO35423 414 aa13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Per3O70361 1113 aa13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Cd300aQ6SJQ0 318 aa13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Olfr1062Q7TR71 315 aa13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Nup54Q8BTS4 510 aaKnown RBP13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Kctd4Q9D7X1 259 aa13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Olfr706Q9EPF8 316 aa13.83□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Bclaf3A2AG58 752 aaKnown RBP13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Ikzf3O08900 507 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Kpna3O35344 521 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Psma3O70435 255 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Npr1P18293 1057 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 PlaaP27612 794 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 S100a13P97352 98 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Lpcat1Q3TFD2 534 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Tapt1Q4VBD2 564 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 LnpepQ8C129 1025 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Ssxb1Q9CPU1 170 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Snx7Q9CY18 387 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 DnpepQ9Z2W0 473 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Ankrd31A0A140LI88 1765 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Gm13119B1ARV5 481 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Vmn2r111K7N674 857 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 HpcaP84075 193 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Tgm3Q08189 693 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Ca4Q64444 305 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Arhgap11aQ80Y19 987 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Aoc2Q812C9 757 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Dlgap2Q8BJ42 1059 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 R3hcc1lQ8BJM3 775 aaKnown RBP13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Nsmce2Q91VT1 247 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Lpin1Q91ZP3 924 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Vps35Q9EQH3 796 aaKnown RBP13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 4930579F01RikE9Q3L6 325 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 SmgcF6VRN1 385 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Btbd3P58545 530 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Rnf157Q3TEL6 685 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Lrrc8bQ5DU41 803 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Ankrd13bQ5F259 626 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Gpbp1l1Q6NZP2 473 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Snx31Q6P8Y7 439 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Rexo4Q6PAQ4 432 aaKnown RBP13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Tas2r129Q7M709 320 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Fnbp1lQ8K012 605 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 MfrpQ8K480 584 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Pcdhb10Q91VE5 797 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Atg13Q91YI1 516 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 HnrnpabQ99020 285 aaKnown RBP13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Wfdc16A2A5H4 111 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Vmn2r59E9PUT5 865 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Gm10721J3QPJ9 223 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Dusp8O09112 663 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Dnase1l3O55070 310 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Kcnn4O89109 425 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 MutP16332 748 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Ppp3cbP48453 525 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Trpv5P69744 723 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Zc3hav1Q3UPF5 946 aaKnown RBP13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Nr1d2Q60674 576 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 StyxQ60969 223 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Smarcal1Q8BJL0 910 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Ccdc17Q8CE13 565 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 PhykplQ8R1K4 467 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Olfr1302Q8VGE9 315 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Slc35a5Q921R7 437 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Spesp1Q9D5A0 399 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 PollQ9QXE2 573 aaKnown RBP13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Gria4Q9Z2W8 902 aa13.82□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 PappaQ8R4K8 1624 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Zfp612A0A1D5RMC2 672 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Gm14401A2ARV7 303 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Gm10717D3Z1I8 228 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Sgo2bJ3QMK1 1167 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 GzmgP13366 248 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Ap1s1P61967 158 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Gata5P97489 404 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Nutm2Q3V0C3 733 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Serpina3gQ5I2A0 440 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Fam46cQ5SSF7 391 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Ints6Q6PCM2 883 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Rad54bQ6PFE3 886 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Myl12aQ6ZWQ9 172 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Ppp2r1bQ7TNP2 601 aaKnown RBP13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Clptm1lQ8BXA5 539 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Trib2Q8K4K3 343 aa13.81□□□□□ -0.2
Pcdha1-202ENSMUST00000193839 Traf3ip2Q8N7N6 555 aa13.81□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms