RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Cyhr1Q9QXA1 311 aa11.57□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Nme4Q9WV84 186 aa11.57□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Ccdc194A0A140LIT1 234 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 1810010D01RikA0A1L1SR87 51 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Kbtbd6E9PYD7 486 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Gm21293E9Q4G9 266 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Kbtbd7G5E8C2 690 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Serpina3kP07759 418 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Cxcl9P18340 126 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Hspa8P63017 646 aaKnown RBP11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Smpd1Q04519 627 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Tmc7Q8C428 726 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Lrrc66Q8K0B3 872 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Hdac11Q91WA3 347 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Them5Q9CQJ0 248 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 DtnaQ9D2N4 746 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Rsph14Q9D3W1 341 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Gm12248A0A1W2P8B8 313 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Mcf2A2AEU1 1111 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Gm17175E9Q528 179 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 C6E9Q6D8 931 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Fbrsl1E9Q9T0 1031 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Sgo2bJ3QMK1 1167 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 GhrP16882 650 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Psmb9P28076 219 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Pou2f2Q00196 463 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Rbp1Q00915 135 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Eps15l1Q60902 907 aaKnown RBP11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Znf235Q61116 645 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Naaladl1Q7M758 745 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Mib1Q80SY4 1006 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Aoc2Q812C9 757 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Zcchc4Q8BKW4 512 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Abraxas1Q8BPZ8 407 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Amz1Q8BVF9 502 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 GancQ8BVW0 898 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Fam78aQ8C552 283 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Ipo13Q8K0C1 963 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Wnt9aQ8R5M2 365 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 DarsQ922B2 501 aaKnown RBP11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 DdoQ922Z0 341 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Q9CR55 154 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Jam2Q9JI59 298 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Actl7aQ9QY84 440 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Fbxo17Q9QZM8 286 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Keap1Q9Z2X8 624 aaKnown RBP11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Brca1P48754 1812 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Arrdc4A0A0B4J1F4 415 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Gm43951A0A0N4SUT6 962 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Olfr726E9Q8X3 321 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Rundc3aO08576 446 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Slc6a20bO88575 635 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Pim3P58750 326 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Olfr725Q05A45 321 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Cyp4f37Q3V1F1 546 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Fscn1Q61553 493 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Cntn4Q69Z26 1026 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Tlr12Q6QNU9 906 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Hmgxb4Q80Y32 594 aaKnown RBP11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Trmt2bQ8BQJ6 493 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Gpr21Q8BX79 349 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Lrrc56Q8K375 552 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Stk32cQ8QZV4 488 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 CtbsQ8R242 366 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Slc6a20aQ8VDB9 592 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Slc22a7Q91WU2 540 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 MvdQ99JF5 401 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Katnbl1Q9CWJ3 299 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Slc28a3Q9ERH8 703 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Insl5Q9WUG6 135 aa11.56□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Gm3752A6NAT4 150 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Zfp882E9Q4R4 555 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Gm10477F6SW83 55 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 B020004C17RikJ3QP07 232 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Mknk1O08605 427 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Ctnnd2O35927 1247 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Cyp2b19O55071 492 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 CcnoP0C242 352 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Ptpn5P54830 541 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 WasP70315 520 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Patl1Q3TC46 770 aaKnown RBP11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Mef2dQ63943 514 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Lrfn2Q80TG9 788 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Pcsk9Q80W65 694 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Amigo2Q80ZD9 519 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Morc4Q8BMD7 928 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Spdye4bQ8CDE8 236 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Gramd1aQ8VEF1 722 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Adam33Q923W9 797 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Pwp1Q99LL5 501 aaKnown RBP11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Unc50Q9CQ61 259 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Raver1Q9CW46 748 aaKnown RBP11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 H2afb2S4R1M3 115 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Nup210lQ9D2F7 1881 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Olfr625-ps1A0A140T8L4 321 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Vmn2r55G3UWZ4 781 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Vmn2r53L7N473 806 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Sec22bO08547 215 aaKnown RBP11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Pbx3O35317 434 aa11.55□□□□□ -0.56
Col9a1-202ENSMUST00000088349 Alox8O35936 677 aa11.55□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms