RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Gdpd5Q640M6 607 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Capn3Q64691 821 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Tas2r125Q7M710 311 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Psmd11Q8BG32 422 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm6367Q8C6L9 287 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Cyp4f13Q99N19 523 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Mkrn2osD3Z393 217 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm5798F7BTS7 198 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Yme1l1O88967 715 aaKnown RBP16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 PlaaP27612 794 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Nos3P70313 1202 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ly9Q01965 654 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Cyb5r4Q3TDX8 528 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gprin1Q3UNH4 932 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Mfhas1Q3V1N1 1048 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Fbxl4Q8BH70 621 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Rasal3Q8C2K5 1041 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Mnd1Q8K396 205 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Pex16Q91XC9 336 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Lima1Q9ERG0 753 aaKnown RBP16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Zfp811A0A0J9YU71 552 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ugt1a2P70691 533 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ugt1a9Q62452 528 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ugt1a1Q63886 535 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Dis3lQ8C0S1 1053 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Robo4Q8C310 1012 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Reep3Q99KK1 254 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Mmtag2Q99LX5 260 aaKnown RBP16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Vav1P27870 845 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Jazf1Q80ZQ5 243 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Fbxo43Q8CDI2 640 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ddx50Q99MJ9 734 aaKnown RBP16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 FancgQ9EQR6 623 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Spata31d1dE9Q5W2 1247 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Fam98aQ3TJZ6 515 aaKnown RBP16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Brf2Q3UAW9 420 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Snx4Q91YJ2 450 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Elovl6Q920L5 267 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Magel2Q9QZ04 1284 aa16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Keap1Q9Z2X8 624 aaKnown RBP16.57■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Hnrnph3D3Z3N4 346 aaKnown RBP16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ccdc126Q8BIS8 140 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Cers6Q8C172 384 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Senp2Q91ZX6 588 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Iigp1Q9QZ85 413 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Dpy19l4A2AJQ3 722 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Znf804aA2AKY4 1200 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 ApoeP08226 311 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 EregQ61521 162 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Abcb10Q9JI39 715 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Vmn2r118E9Q1C1 853 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Aqp8P56404 261 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Cyp4a32A2A8T1 509 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ccdc177Q3UHB8 706 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Trim40Q3UWA4 246 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 P4ha2Q60716 537 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Kcnq3Q8K3F6 873 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm10324L7N208 604 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm4778L7N229 365 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Itga3Q62470 1053 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Cpsf7Q8BTV2 471 aaKnown RBP16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ldhal6bQ8BVP2 382 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Olfr806Q8VFI2 313 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Fastkd2Q922E6 689 aaKnown RBP16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Aak1Q3UHJ0 959 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Bcar1Q61140 874 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Il1rapQ61730 570 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Scube3Q66PY1 993 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 MiosQ8VE19 875 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Rem2Q8VEL9 341 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Lpgat1Q91YX5 370 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Slit2Q9R1B9 1521 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 DbiP31786 87 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Zbtb2Q3V3W4 514 aaKnown RBP16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 SncgQ9Z0F7 123 aaKnown RBP16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm16506F7ANP4 213 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Map2k7Q8CE90 535 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Cby3Q9CVN6 235 aa16.56■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gpr137cE9Q343 423 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Tas2r16P59529 299 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 SPINDOCQ05AH6 381 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Rnft2Q3UF64 445 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Sf1Q64213 653 aaKnown RBP16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Hmgb4Q6P8W9 181 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 TympQ99N42 471 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Slc24a3Q99PD7 645 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Cndp2Q9D1A2 475 aaKnown RBP16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Hm13Q9D8V0 378 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Tysnd1Q9DBA6 568 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Trip6Q9Z1Y4 480 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ddx43D3Z6P9 646 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Pfkfb2P70265 519 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Pcdh20Q8BIZ0 952 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Thap3Q8BJ25 218 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Ift80Q8K057 777 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Tmbim6Q9D2C7 237 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Dnajb4Q9D832 337 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Dgat1Q9Z2A7 498 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Vmn2r72D3Z4N8 856 aa16.55■□□□□ 0.24
Ccdc88a-201ENSMUST00000040182 Gm11397F6V5V4 377 aa16.55■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 30 ms