RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Pcdhb21Q91V48 774 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Rassf3Q99P51 232 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Clec2gQ9D676 269 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Snx5Q9D8U8 404 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Ptges3lQ9D9A7 131 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Maged2Q9ER67 616 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Rps6ka2Q9WUT3 733 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Gm30302A0A1Y7VN40 1110 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Zfp990B1AVN5 605 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Rhox2hK7N6P1 191 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Gm8011K7N6Y5 207 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Vmn2r57L7N269 863 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Stmn3O70166 180 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 CtswP56203 371 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Hsd17b3P70385 305 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 SgcdP82347 289 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Kcnk2P97438 426 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 BcheQ03311 603 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 D630036H23RikQ3UQD6 204 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Mrm3Q5ND52 418 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Khdrbs1Q60749 443 aaKnown RBP12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Mtnr1aQ61184 353 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Kiaa1841Q68FF0 718 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Ckmt2Q6P8J7 419 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 RimklaQ6PFX8 380 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Mfn2Q80U63 757 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Klhl26Q8BGY4 606 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Il17reQ8BH06 637 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Sephs1Q8BH69 392 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Fam49aQ8BHZ0 323 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Sec22cQ8BXT9 303 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Gm4922Q8C0N0 497 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Parp9Q8CAS9 866 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Zmiz2Q8CIE2 920 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Kbtbd12Q9D618 625 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Cntd1Q9D995 334 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Atp13a1Q9EPE9 1200 aaKnown RBP12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Tor1bQ9ER41 336 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Map3k6Q9WTR2 1291 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Zfp563B8JJZ9 448 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Gm4841E9QAA8 417 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Smim18J3QNP2 93 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 BdnfP21237 249 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Tacr2P30549 384 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Map4k1P70218 827 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Gpr143P70259 405 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Fmo5P97872 533 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Emx1Q04742 257 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Olfr1057Q7TR75 315 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 RimklbQ80WS1 387 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Fam205cQ80YD3 371 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Zfp719Q8BIV1 735 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Olfr397Q8VEZ6 315 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Nr3c2Q8VII8 978 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Dlg2Q91XM9 852 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Mta3Q924K8 591 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Abcb8Q9CXJ4 717 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Gm3404Q9D506 307 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 2010109A12RikQ9D875 119 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Pdzk1Q9JIL4 519 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Nufip1Q9QXX8 484 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Dnajb9Q9QYI6 222 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Nme4Q9WV84 186 aa12.34□□□□□ -0.43
Trim23-201ENSMUST00000022225 Gbp4A4UUI3 631 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Skint6A7XUZ6 1240 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Ces1bD3Z5G7 567 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 FgaE9PV24 789 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Atn1O35126 1175 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Cpa3P15089 417 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Ap2a1P17426 977 aaKnown RBP12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Alg6Q3TAE8 507 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Plk5Q4FZD7 595 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Bpifb1Q61114 474 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Gja6Q6S5G4 283 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Ncs1Q8BNY6 190 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 AA792892Q8C6S1 278 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Prmt5Q8CIG8 637 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Snrnp25Q8VIK1 123 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Fam49bQ921M7 324 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Mccc1Q99MR8 717 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Lrrc71Q9D3W5 558 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Q9D4W2 315 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 CsadQ9DBE0 493 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Bag6Q9Z1R2 1154 aaKnown RBP12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Nhsl2B1AXH1 854 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 B020004C17RikJ3QP07 232 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Matn3O35701 481 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Sh3pxd2aO89032 1124 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Rpl36P47964 105 aaKnown RBP12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Rab10P61027 200 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Zdhhc11Q14AK4 347 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Pdss2Q33DR3 401 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Itga7Q61738 1179 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Cyp2r1Q6VVW9 501 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Vmn2r81Q80Z09 865 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 BpifcQ8C186 509 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Vmn1r215Q8R264 300 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Sp7Q8VI67 428 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Rgs10Q9CQE5 181 aa12.33□□□□□ -0.44
Trim23-201ENSMUST00000022225 Micu3Q9CTY5 523 aa12.33□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms