RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 C2CD4AQ8NCU7 369 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-221ENST00000641573 OR2A12Q8NGT7 310 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 OR6P1Q8NGX9 317 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 GABPB2Q8TAK5 448 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-221ENST00000641573 CALML6Q8TD86 181 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 MGARPQ8TDB4 240 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 CENPTQ96BT3 561 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 TBATAQ96M53 351 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 SUV39H2Q9H5I1 410 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 INTS9Q9NV88 658 aaKnown RBP13.12□□□□□ -0.31
PHGDH-221ENST00000641573 NLE1Q9NVX2 485 aaPredicted RBP13.12□□□□□ -0.31
PHGDH-221ENST00000641573 NKIRAS1Q9NYS0 192 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 GTSE1Q9NYZ3 720 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 GMEB2Q9UKD1 530 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 ZNF711Q9Y462 761 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 ATRXP46100 2492 aa13.12□□□□□ -0.31
PHGDH-221ENST00000641573 A0A0J9YYE9 177 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 CCDC162PA2VCL2 907 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-221ENST00000641573 SHOX2O60902 331 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-221ENST00000641573 TRBC1P01850 177 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 SLC4A1P02730 911 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 ALPIP09923 528 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 PSMA3P25788 255 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 CCNFP41002 786 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 SLC1A2P43004 574 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 ABCG1P45844 678 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 SLC18A1P54219 525 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 PDE1BQ01064 536 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 CSTF1Q05048 431 aaKnown RBP13.11□□□□□ -0.31
PHGDH-221ENST00000641573 DMWDQ09019 674 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 HTR4Q13639 388 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 EIF4HQ15056 248 aaKnown RBP13.11□□□□□ -0.31
PHGDH-221ENST00000641573 TERF2Q15554 542 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 UGP2Q16851 508 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 ITPRIPL2Q3MIP1 535 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 NAIF1Q69YI7 327 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-221ENST00000641573 ZNF470Q6ECI4 717 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 GDPD4Q6W3E5 623 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 PTAR1Q7Z6K3 402 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-221ENST00000641573 ZSWIM9Q86XI8 627 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 OTUD6BQ8N6M0 293 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 TERB1Q8NA31 727 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 OR4K2Q8NGD2 314 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 ECHDC3Q96DC8 303 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 ATXN7L3BQ96GX2 97 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 CDKN2AIPNLQ96HQ2 116 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 APOPT1Q96IL0 206 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 ZNF641Q96N77 438 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-221ENST00000641573 HEPHQ9BQS7 1158 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 MCMBPQ9BTE3 642 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 RHOJQ9H4E5 214 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 SUDS3Q9H7L9 328 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-221ENST00000641573 MAGEE1Q9HCI5 957 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 SLC2A4RGQ9NR83 387 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 POLR3BQ9NW08 1133 aaPredicted RBP13.11□□□□□ -0.31
PHGDH-221ENST00000641573 FBXO5Q9UKT4 447 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 PHTF1Q9UMS5 762 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 PLA2G4CQ9UP65 541 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 MTO1Q9Y2Z2 717 aaKnown RBP13.11□□□□□ -0.31
PHGDH-221ENST00000641573 NUMBLQ9Y6R0 609 aa13.11□□□□□ -0.31
PHGDH-221ENST00000641573 COL4A3Q01955 1670 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 A0A1W2PQ67 120 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 TBC1D3BA6NDS4 549 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 OR51F1A6NGY5 319 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 ANHXE9PGG2 379 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 COPEO14579 308 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 TPP1O14773 563 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 STX7O15400 261 aaKnown RBP13.1□□□□□ -0.31
PHGDH-221ENST00000641573 GOT2P00505 430 aaKnown RBP13.1□□□□□ -0.31
PHGDH-221ENST00000641573 AHSGP02765 367 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 UGT2B4P06133 528 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 GLULP15104 373 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 GABRB3P28472 473 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 RPA3P35244 121 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-221ENST00000641573 HNF1BP35680 557 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 EIF2DP41214 584 aaKnown RBP13.1□□□□□ -0.31
PHGDH-221ENST00000641573 NEK3P51956 506 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 STARD6P59095 220 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 LRRC14Q15048 493 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 FNDC3BQ53EP0 1204 aaKnown RBP13.1□□□□□ -0.31
PHGDH-221ENST00000641573 PPM1JQ5JR12 505 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 FSTL4Q6MZW2 842 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 KIAA0408Q6ZU52 694 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 LYSMD3Q7Z3D4 306 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 ZC3HC1Q86WB0 502 aaKnown RBP13.1□□□□□ -0.31
PHGDH-221ENST00000641573 SFTPA1Q8IWL2 248 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 LMNTD2Q8IXW0 634 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 MAML2Q8IZL2 1156 aaPredicted RBP13.1□□□□□ -0.31
PHGDH-221ENST00000641573 NDUFAF2Q8N183 169 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 KDM1BQ8NB78 822 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 OR4L1Q8NH43 312 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 GRIN3AQ8TCU5 1115 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 ACMSDQ8TDX5 336 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 DENND1AQ8TEH3 1009 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 SGSM3Q96HU1 749 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 VPS39Q96JC1 886 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 KLHL32Q96NJ5 620 aa13.1□□□□□ -0.31
PHGDH-221ENST00000641573 SRPK1Q96SB4 655 aaKnown RBP13.1□□□□□ -0.31
PHGDH-221ENST00000641573 GPR63Q9BZJ6 419 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms