RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 DNAJC28Q9NX36 388 aa13.88□□□□□ -0.19
ATRIP-208ENST00000639561 TMEM114B3SHH9 223 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 STK25O00506 426 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 GYG2O15488 501 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 GSC2O15499 205 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 TSPAN3O60637 253 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 CLDN11O75508 207 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 ATP5BP06576 529 aaKnown RBP13.87□□□□□ -0.19
ATRIP-208ENST00000639561 GRIA4P48058 902 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 EPHA5P54756 1037 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 POU4F1Q01851 419 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 OR6P1Q8NGX9 317 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 AGR3Q8TD06 166 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 CALML6Q8TD86 181 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 TSNARE1Q96NA8 513 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 KLF16Q9BXK1 252 aaPredicted RBP13.87□□□□□ -0.19
ATRIP-208ENST00000639561 CDH19Q9H159 772 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 TBC1D17Q9HA65 648 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 SMPD4Q9NXE4 827 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.87□□□□□ -0.19
ATRIP-208ENST00000639561 MID2Q9UJV3 735 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 MTF2Q9Y483 593 aaPredicted RBP13.87□□□□□ -0.19
ATRIP-208ENST00000639561 ASB3Q9Y575 518 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 KRBA1A5PL33 1030 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 KDELR3O43731 214 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 DLX3O60479 287 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 EPOP01588 193 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 FGF1P05230 155 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 SERPINF2P08697 491 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 HLA-DPA1P20036 260 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 ACVR1Q04771 509 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 E2F5Q15329 346 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 ADGRF1Q5T601 910 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 CXorf57Q6NSI4 855 aaKnown RBP13.87□□□□□ -0.19
ATRIP-208ENST00000639561 MAPK15Q8TD08 544 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 HEXDCQ8WVB3 486 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 ELSPBP1Q96BH3 223 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 DNAJC1Q96KC8 554 aaKnown RBP13.87□□□□□ -0.19
ATRIP-208ENST00000639561 ZFRQ96KR1 1074 aaKnown RBP13.87□□□□□ -0.19
ATRIP-208ENST00000639561 TBATAQ96M53 351 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 SLC22A12Q96S37 553 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 KXD1Q9BQD3 176 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 DENND2DQ9H6A0 471 aaPredicted RBP13.87□□□□□ -0.19
ATRIP-208ENST00000639561 COG4Q9H9E3 785 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 IGSF5Q9NSI5 407 aa13.87□□□□□ -0.19
ATRIP-208ENST00000639561 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.87□□□□□ -0.19
ATRIP-208ENST00000639561 UBA2Q9UBT2 640 aaPredicted RBP13.87□□□□□ -0.19
ATRIP-208ENST00000639561 APOBEC2Q9Y235 224 aaKnown RBP13.87□□□□□ -0.19
ATRIP-208ENST00000639561 A0A1B0GVM2 712 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 ILVBLA1L0T0 632 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 TCAF2A6NFQ2 919 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 H2AFYO75367 372 aaKnown RBP13.86□□□□□ -0.19
ATRIP-208ENST00000639561 FGF19O95750 216 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 RHOCP08134 193 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 MPSTP25325 297 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 NAGLUP54802 743 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 OXCT1P55809 520 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 PRAMEP78395 509 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 KDSRQ06136 332 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 DNAJB7Q7Z6W7 309 aaPredicted RBP13.86□□□□□ -0.19
ATRIP-208ENST00000639561 ITIH5Q86UX2 942 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 TEX9Q8N6V9 391 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 OR13C4Q8NGS5 318 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 SH3RF2Q8TEC5 729 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 ATOH1Q92858 354 aaPredicted RBP13.86□□□□□ -0.19
ATRIP-208ENST00000639561 CYP2S1Q96SQ9 504 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 RPP25Q9BUL9 199 aaKnown RBP13.86□□□□□ -0.19
ATRIP-208ENST00000639561 DRC3Q9H069 523 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 RETREG1Q9H6L5 497 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 SEPT3Q9UH03 358 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 DIAPH2O60879 1101 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 WFS1O76024 890 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 S1PR4O95977 384 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 MYL4P12829 197 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 CR2P20023 1033 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 SLC8A1P32418 973 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 SLC12A2P55011 1212 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 ZXDBP98169 803 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 PRKCQQ04759 706 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 TAF12Q16514 161 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 ARL13AQ5H913 290 aaPredicted RBP13.86□□□□□ -0.19
ATRIP-208ENST00000639561 CHST9Q7L1S5 443 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 GALNT7Q86SF2 657 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 RBM15BQ8NDT2 890 aaKnown RBP13.86□□□□□ -0.19
ATRIP-208ENST00000639561 SREK1Q8WXA9 508 aaKnown RBP13.86□□□□□ -0.19
ATRIP-208ENST00000639561 CINPQ9BW66 212 aaPredicted RBP13.86□□□□□ -0.19
ATRIP-208ENST00000639561 MRPL46Q9H2W6 279 aaKnown RBP13.86□□□□□ -0.19
ATRIP-208ENST00000639561 ZNF334Q9HCZ1 680 aaPredicted RBP13.86□□□□□ -0.19
ATRIP-208ENST00000639561 TAGLN3Q9UI15 199 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 TBC1D30Q9Y2I9 924 aa13.86□□□□□ -0.19
ATRIP-208ENST00000639561 A0A087X1B8 175 aa13.85□□□□□ -0.19
ATRIP-208ENST00000639561 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.85□□□□□ -0.19
ATRIP-208ENST00000639561 B2RBV5 119 aa13.85□□□□□ -0.19
ATRIP-208ENST00000639561 CBX4O00257 560 aa13.85□□□□□ -0.19
ATRIP-208ENST00000639561 PEX11AO75192 247 aa13.85□□□□□ -0.19
ATRIP-208ENST00000639561 SCNN1BP51168 640 aa13.85□□□□□ -0.19
ATRIP-208ENST00000639561 CDKN2DP55273 166 aa13.85□□□□□ -0.19
ATRIP-208ENST00000639561 ZNF177Q13360 481 aaPredicted RBP13.85□□□□□ -0.19
ATRIP-208ENST00000639561 CSHL1Q14406 222 aa13.85□□□□□ -0.19
ATRIP-208ENST00000639561 VEPH1Q14D04 833 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms