RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 PPFIBP2Q8ND30 876 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 AUTS2Q8WXX7 1259 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 VWCEQ96DN2 955 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 L3HYPDHQ96EM0 354 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 SLC22A12Q96S37 553 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 COL4A6Q14031 1691 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 H0Y626 953 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 UBFD1O14562 309 aaKnown RBP21.49■■□□□ 1.03
CLN6-224ENST00000638076 TBL1XO60907 577 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 SMIM24O75264 130 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 BAG2O95816 211 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 PENKP01210 267 aaPredicted RBP21.49■■□□□ 1.03
CLN6-224ENST00000638076 CCL5P13501 91 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 TSPAN8P19075 237 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 CDC25CP30307 473 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 FMO4P31512 558 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 PPP3CCP48454 512 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 CMPK2Q5EBM0 449 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 KYQ8NBH2 561 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 TOP1MTQ969P6 601 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 ZFRQ96KR1 1074 aaKnown RBP21.49■■□□□ 1.03
CLN6-224ENST00000638076 MEAF6Q9HAF1 191 aa21.49■■□□□ 1.03
CLN6-224ENST00000638076 MZF1P28698 734 aaPredicted RBP21.48■■□□□ 1.03
CLN6-224ENST00000638076 NFKB2Q00653 900 aa21.48■■□□□ 1.03
CLN6-224ENST00000638076 RAB33AQ14088 237 aa21.48■■□□□ 1.03
CLN6-224ENST00000638076 CCNIQ14094 377 aa21.48■■□□□ 1.03
CLN6-224ENST00000638076 OR4D1Q15615 310 aa21.48■■□□□ 1.03
CLN6-224ENST00000638076 DSELQ8IZU8 1212 aa21.48■■□□□ 1.03
CLN6-224ENST00000638076 PELI3Q8N2H9 469 aa21.48■■□□□ 1.03
CLN6-224ENST00000638076 PYDC1Q8WXC3 89 aa21.48■■□□□ 1.03
CLN6-224ENST00000638076 RCN3Q96D15 328 aa21.48■■□□□ 1.03
CLN6-224ENST00000638076 S100A14Q9HCY8 104 aa21.48■■□□□ 1.03
CLN6-224ENST00000638076 STOML2Q9UJZ1 356 aa21.48■■□□□ 1.03
CLN6-224ENST00000638076 ANKRD66B4E2M5 251 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 H3BMM5 538 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 RHOBTB1O94844 696 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 ABL2P42684 1182 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 HERVK_113P63132 956 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 HERC3Q15034 1050 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 EML3Q32P44 896 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 UNC50Q53HI1 259 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 AAGABQ6PD74 315 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 C16orf89Q6UX73 402 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 KIRREL3Q8IZU9 778 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 SLC26A7Q8TE54 656 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 LPGAT1Q92604 370 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 TRMOQ9BU70 441 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 HERC2P3Q9BVR0 1158 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 ERVK-6Q9BXR3 956 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 ADGRE3Q9BY15 652 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 NDE1Q9NXR1 346 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 FAM50BQ9Y247 325 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 TRAF6Q9Y4K3 522 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 NDUFS3O75489 264 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 URODP06132 367 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 ARSAP15289 507 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 LPOP22079 712 aaPredicted RBP21.47■■□□□ 1.03
CLN6-224ENST00000638076 CDKN1CP49918 316 aaPredicted RBP21.47■■□□□ 1.03
CLN6-224ENST00000638076 TRAF2Q12933 501 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 FAM219BQ5XKK7 198 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 CLEC6AQ6EIG7 209 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 EFHBQ8N7U6 833 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 TOX2Q96NM4 488 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 CCDC68Q9H2F9 335 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 PACSIN3Q9UKS6 424 aa21.47■■□□□ 1.03
CLN6-224ENST00000638076 UBXN8O00124 270 aa21.46■■□□□ 1.03
CLN6-224ENST00000638076 MAP3K7O43318 606 aa21.46■■□□□ 1.03
CLN6-224ENST00000638076 SRP72O76094 671 aaKnown RBP21.46■■□□□ 1.03
CLN6-224ENST00000638076 LUC7L3O95232 432 aaKnown RBP21.46■■□□□ 1.03
CLN6-224ENST00000638076 HTRA3P83110 453 aa21.46■■□□□ 1.03
CLN6-224ENST00000638076 PTGR2Q8N8N7 351 aaPredicted RBP21.46■■□□□ 1.03
CLN6-224ENST00000638076 JADE3Q92613 823 aa21.46■■□□□ 1.03
CLN6-224ENST00000638076 ZNF689Q96CS4 500 aaPredicted RBP21.46■■□□□ 1.03
CLN6-224ENST00000638076 ZNF334Q9HCZ1 680 aaPredicted RBP21.46■■□□□ 1.03
CLN6-224ENST00000638076 TAS2R13Q9NYV9 303 aa21.46■■□□□ 1.03
CLN6-224ENST00000638076 INSL5Q9Y5Q6 135 aa21.46■■□□□ 1.03
CLN6-224ENST00000638076 CCDC189A1A4V9 331 aa21.46■■□□□ 1.03
CLN6-224ENST00000638076 EPHB3P54753 998 aa21.46■■□□□ 1.03
CLN6-224ENST00000638076 PTPRRQ15256 657 aa21.46■■□□□ 1.03
CLN6-224ENST00000638076 PAQR3Q6TCH7 311 aa21.46■■□□□ 1.03
CLN6-224ENST00000638076 ZNF783Q6ZMS7 281 aa21.46■■□□□ 1.03
CLN6-224ENST00000638076 ARL14EPQ8N8R7 260 aaPredicted RBP21.46■■□□□ 1.03
CLN6-224ENST00000638076 HIPK4Q8NE63 616 aa21.46■■□□□ 1.03
CLN6-224ENST00000638076 RHEBL1Q8TAI7 183 aa21.46■■□□□ 1.03
CLN6-224ENST00000638076 BPIFA1Q9NP55 256 aa21.46■■□□□ 1.03
CLN6-224ENST00000638076 FKBPLQ9UIM3 349 aa21.46■■□□□ 1.03
CLN6-224ENST00000638076 VPS28Q9UK41 221 aa21.46■■□□□ 1.03
CLN6-224ENST00000638076 PRPF19Q9UMS4 504 aaKnown RBP21.46■■□□□ 1.03
CLN6-224ENST00000638076 MED16Q9Y2X0 877 aa21.46■■□□□ 1.03
CLN6-224ENST00000638076 ANAPC1Q9H1A4 1944 aa21.46■■□□□ 1.03
CLN6-224ENST00000638076 MTHFD2P13995 350 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 PSMA3P25788 255 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 MNX1P50219 401 aaPredicted RBP21.45■■□□□ 1.02
CLN6-224ENST00000638076 CDH13P55290 713 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 ZXDBP98169 803 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 PPP1R3AQ16821 1122 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 SETMARQ53H47 684 aaPredicted RBP21.45■■□□□ 1.02
CLN6-224ENST00000638076 TXNDC8Q6A555 127 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 NCEH1Q6PIU2 408 aa21.45■■□□□ 1.02
CLN6-224ENST00000638076 CHSY3Q70JA7 882 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms