RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 PRAMEF18Q5VWM3 479 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 GALNT18Q6P9A2 607 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 DCP1BQ8IZD4 617 aaKnown RBP14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 TOP6BLQ8N6T0 577 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 ERVK-6Q9BXR3 956 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 ULBP1Q9BZM6 244 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 CNGB3Q9NQW8 809 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 GIN1Q9NXP7 522 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 TMED5Q9Y3A6 229 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 NRCAMQ92823 1304 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 C1orf232A0A0U1RR37 186 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 TCRBV5S2A0A599 114 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 CCDC162PA2VCL2 907 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 J3QRK9 145 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 ABCB7O75027 752 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 VPS4BO75351 444 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 E2F6O75461 281 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 BEST1O76090 585 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 NCAM1P13591 858 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 LBPP18428 481 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 JAK1P23458 1154 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 CAPRIN1Q14444 709 aaKnown RBP14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 CBX2Q14781 532 aaPredicted RBP14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 ZNF280DQ6N043 979 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 ATPAF2Q8N5M1 289 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 FBXL8Q96CD0 374 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 CELF6Q96J87 481 aaKnown RBP14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 GLT1D1Q96MS3 346 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 PPP1R10Q96QC0 940 aaKnown RBP14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 ZNF347Q96SE7 839 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 IL12RB2Q99665 862 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 KCTD14Q9BQ13 255 aaPredicted RBP14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 MED10Q9BTT4 135 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 RAD21L1Q9H4I0 556 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 ALG2Q9H553 416 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 FANCEQ9HB96 536 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 TRIM17Q9Y577 477 aa14.81□□□□□ -0.04
CACNA1A-220ENST00000635988 C16orf96A6NNT2 1141 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 CLDN5O00501 218 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 RECQL4O94761 1208 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 SNAP29O95721 258 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 DPEP1P16444 411 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 HOXA11P31270 313 aaPredicted RBP14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 CXCR3P49682 368 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 GSK3BP49841 420 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 GMPSP49915 693 aaPredicted RBP14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 EEFSECP57772 596 aaKnown RBP14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 GRIK2Q13002 908 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 ITGADQ13349 1161 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 KCTD2Q14681 263 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 ZNF846Q147U1 533 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 FSCN1Q16658 493 aaKnown RBP14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 UNC50Q53HI1 259 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 RBM48Q5RL73 367 aaKnown RBP14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 HECTD2Q5U5R9 776 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 PM20D1Q6GTS8 502 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 NOTUMQ6P988 496 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 BLOC1S3Q6QNY0 202 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 RAB44Q7Z6P3 723 aaPredicted RBP14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 MINDY2Q8NBR6 621 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 ZC3H15Q8WU90 426 aaKnown RBP14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 TMEM125Q96AQ2 219 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 BEGAINQ9BUH8 593 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 NANOGQ9H9S0 305 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 VWA7Q9Y334 891 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 DNAJC15Q9Y5T4 150 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 DNAJC25-GNG10A0A024R161 153 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 HTR3EA5X5Y0 456 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 YJEFN3A6XGL0 299 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 UBXN8O00124 270 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 ARHGAP1Q07960 439 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 PLCL1Q15111 1095 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 LINC00299Q6ZSB3 139 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 PAQR9Q6ZVX9 377 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 CATSPER4Q7RTX7 472 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 PROSER1Q86XN7 944 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 TTC30BQ8N4P2 665 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 SNX19Q92543 992 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 CCDC138Q96M89 665 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 TKTL2Q9H0I9 626 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 ING2Q9H160 280 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 CORINQ9Y5Q5 1042 aa14.8□□□□□ -0.04
CACNA1A-220ENST00000635988 A0A1W2PP18 115 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 AURKAO14965 403 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 AZIN1O14977 448 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 GSTM2P28161 218 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 HOXD12P35452 270 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 YAP1P46937 504 aaKnown RBP14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 MAP3K7CLP57077 242 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 RPS3AP61247 264 aaKnown RBP14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 GNA12Q03113 381 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 OCA2Q04671 838 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 NFYCQ13952 458 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 TAF2Q6P1X5 1199 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 RANBP10Q6VN20 620 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 OSTM1Q86WC4 334 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 TWIST2Q8WVJ9 160 aa14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 EIF2AQ9BY44 585 aaKnown RBP14.79□□□□□ -0.04
CACNA1A-220ENST00000635988 ALG9Q9H6U8 611 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms