RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 SARM1Q6SZW1 724 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 Q6ZVL8 140 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 HSD11B1LQ7Z5J1 315 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 ARL14Q8N4G2 192 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 PQLC3Q8N755 202 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 ZNF248Q8NDW4 579 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 RAPGEF5Q92565 580 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 CCDC74AQ96AQ1 378 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 PKD2L2Q9NZM6 624 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 SEPT10Q9P0V9 454 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 CHKBQ9Y259 395 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 PPIL1Q9Y3C6 166 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 LRP4O75096 1905 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 MYLKQ15746 1914 aa13.05□□□□□ -0.32
ATRX-208ENST00000622960 GOLGA4Q13439 2230 aaKnown RBP13.05□□□□□ -0.32
ATRX-208ENST00000622960 ARID1BQ8NFD5 2236 aaPredicted RBP13.05□□□□□ -0.32
ATRX-208ENST00000622960 CFAP47Q6ZTR5 3102 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 C1orf232A0A0U1RR37 186 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 EIF4E1BA6NMX2 242 aaKnown RBP13.04□□□□□ -0.32
ATRX-208ENST00000622960 KCNK1O00180 336 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 PSTPIP1O43586 416 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 JCHAINP01591 159 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 PDHA1P08559 390 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 GLB1P16278 677 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 EIF2S3P41091 472 aaKnown RBP13.04□□□□□ -0.32
ATRX-208ENST00000622960 CD86P42081 329 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 MAGEA1P43355 309 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 GNPDA1P46926 289 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 LSSP48449 732 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 ERVPABLB-1P60509 514 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 DYNLT1P63172 113 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 IFI35P80217 286 aaPredicted RBP13.04□□□□□ -0.32
ATRX-208ENST00000622960 DPTQ07507 201 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 PPIDQ08752 370 aaKnown RBP13.04□□□□□ -0.32
ATRX-208ENST00000622960 C14orf28Q4W4Y0 310 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 PERM1Q5SV97 790 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 FOXR1Q6PIV2 292 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 DOK6Q6PKX4 331 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 ZNF765Q7L2R6 523 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 TSPAN33Q86UF1 283 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 PDZD3Q86UT5 571 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 CPNE8Q86YQ8 564 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 CCDC50Q8IVM0 306 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 RAVER1Q8IY67 606 aaKnown RBP13.04□□□□□ -0.32
ATRX-208ENST00000622960 CCDC170Q8IYT3 715 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 WDR36Q8NI36 951 aaKnown RBP13.04□□□□□ -0.32
ATRX-208ENST00000622960 PIH1D2Q8WWB5 315 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 RNF25Q96BH1 459 aaPredicted RBP13.04□□□□□ -0.32
ATRX-208ENST00000622960 CCDC97Q96F63 343 aaPredicted RBP13.04□□□□□ -0.32
ATRX-208ENST00000622960 FERMT1Q9BQL6 677 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 TEX101Q9BY14 249 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 ZMYND15Q9H091 742 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 TMEM168Q9H0V1 697 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 EPB41L5Q9HCM4 733 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 MRPL40Q9NQ50 206 aaKnown RBP13.04□□□□□ -0.32
ATRX-208ENST00000622960 TRNAU1APQ9NX07 287 aaKnown RBP13.04□□□□□ -0.32
ATRX-208ENST00000622960 SATB2Q9UPW6 733 aa13.04□□□□□ -0.32
ATRX-208ENST00000622960 CCDC187A0A096LP49 1063 aa13.03□□□□□ -0.32
ATRX-208ENST00000622960 FZD6O60353 706 aa13.03□□□□□ -0.32
ATRX-208ENST00000622960 ASMTLO95671 621 aa13.03□□□□□ -0.32
ATRX-208ENST00000622960 RPLP0P05388 317 aaKnown RBP13.03□□□□□ -0.32
ATRX-208ENST00000622960 PNLIPP16233 465 aa13.03□□□□□ -0.32
ATRX-208ENST00000622960 GM2AP17900 193 aa13.03□□□□□ -0.32
ATRX-208ENST00000622960 MLLT3P42568 568 aaPredicted RBP13.03□□□□□ -0.32
ATRX-208ENST00000622960 NR2C2P49116 596 aa13.03□□□□□ -0.32
ATRX-208ENST00000622960 PPM1FP49593 454 aaPredicted RBP13.03□□□□□ -0.32
ATRX-208ENST00000622960 EIF3IQ13347 325 aaKnown RBP13.03□□□□□ -0.32
ATRX-208ENST00000622960 SLC9A4Q6AI14 798 aa13.03□□□□□ -0.32
ATRX-208ENST00000622960 ADAMTSL4Q6UY14 1074 aa13.03□□□□□ -0.32
ATRX-208ENST00000622960 CCNJLQ8IV13 435 aa13.03□□□□□ -0.32
ATRX-208ENST00000622960 NRSN1Q8IZ57 195 aa13.03□□□□□ -0.32
ATRX-208ENST00000622960 PLD5Q8N7P1 536 aa13.03□□□□□ -0.32
ATRX-208ENST00000622960 EXD1Q8NHP7 514 aa13.03□□□□□ -0.32
ATRX-208ENST00000622960 ATXN7L3BQ96GX2 97 aa13.03□□□□□ -0.32
ATRX-208ENST00000622960 NSMCE3Q96MG7 304 aa13.03□□□□□ -0.32
ATRX-208ENST00000622960 TMEM74Q96NL1 305 aa13.03□□□□□ -0.32
ATRX-208ENST00000622960 MLPHQ9BV36 600 aaPredicted RBP13.03□□□□□ -0.32
ATRX-208ENST00000622960 LGR4Q9BXB1 951 aa13.03□□□□□ -0.32
ATRX-208ENST00000622960 RAD18Q9NS91 495 aa13.03□□□□□ -0.32
ATRX-208ENST00000622960 AKAP7Q9P0M2 348 aaPredicted RBP13.03□□□□□ -0.32
ATRX-208ENST00000622960 CD84Q9UIB8 345 aa13.03□□□□□ -0.32
ATRX-208ENST00000622960 SUFUQ9UMX1 484 aa13.03□□□□□ -0.32
ATRX-208ENST00000622960 ADAMTS20P59510 1910 aa13.02□□□□□ -0.32
ATRX-208ENST00000622960 RHPN2P1A8MT19 583 aa13.02□□□□□ -0.33
ATRX-208ENST00000622960 D6RAR5 112 aa13.02□□□□□ -0.33
ATRX-208ENST00000622960 MTSS1O43312 755 aa13.02□□□□□ -0.33
ATRX-208ENST00000622960 TLX3O43711 291 aaPredicted RBP13.02□□□□□ -0.33
ATRX-208ENST00000622960 NUDT21O43809 227 aaKnown RBP13.02□□□□□ -0.33
ATRX-208ENST00000622960 DXOO77932 396 aaKnown RBP13.02□□□□□ -0.33
ATRX-208ENST00000622960 IVLP07476 585 aa13.02□□□□□ -0.33
ATRX-208ENST00000622960 COMTP21964 271 aa13.02□□□□□ -0.33
ATRX-208ENST00000622960 STC1P52823 247 aa13.02□□□□□ -0.33
ATRX-208ENST00000622960 UCNP55089 124 aa13.02□□□□□ -0.33
ATRX-208ENST00000622960 INHBCP55103 352 aa13.02□□□□□ -0.33
ATRX-208ENST00000622960 CCDC173Q0VFZ6 552 aa13.02□□□□□ -0.33
ATRX-208ENST00000622960 LRP8Q14114 963 aa13.02□□□□□ -0.33
ATRX-208ENST00000622960 TCEAL1Q15170 157 aa13.02□□□□□ -0.33
ATRX-208ENST00000622960 MAP9Q49MG5 647 aa13.02□□□□□ -0.33
ATRX-208ENST00000622960 CERCAMQ5T4B2 595 aa13.02□□□□□ -0.33
ATRX-208ENST00000622960 NT5DC3Q86UY8 548 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms