RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 GLB1LQ6UWU2 654 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 LDB1Q86U70 411 aaPredicted RBP9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 DHFR2Q86XF0 187 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 HERC6Q8IVU3 1022 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 SPNS2Q8IVW8 549 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 AQP12AQ8IXF9 295 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 COLGALT2Q8IYK4 626 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 GALNT4Q8N4A0 578 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 MINDY1Q8N5J2 469 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 PACRGLQ8N7B6 248 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 PTGR2Q8N8N7 351 aaPredicted RBP9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 KLHDC9Q8NEP7 349 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 OR2T34Q8NGX1 318 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 OR2T3Q8NH03 318 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 BRSK1Q8TDC3 778 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 SH3RF2Q8TEC5 729 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 LRTOMTQ8WZ04 291 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 PABPC5Q96DU9 382 aaKnown RBP9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 DNAJC1Q96KC8 554 aaKnown RBP9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 CNBD2Q96M20 576 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 C3orf30Q96M34 536 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 TRIB3Q96RU7 358 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 SEMA3CQ99985 751 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 C1QTNF3Q9BXJ4 246 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 POLR1EQ9GZS1 481 aaKnown RBP9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 PCDHAC1Q9H158 963 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 AKTIPQ9H8T0 292 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 PDFQ9HBH1 243 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 CATSPERZQ9NTU4 200 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 INTS10Q9NVR2 710 aaKnown RBP9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 CCDC167Q9P0B6 97 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 MAP10Q9P2G4 905 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 CNOT6Q9ULM6 557 aaKnown RBP9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 TMCO1Q9UM00 188 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 RNF11Q9Y3C5 154 aa9.61□□□□□ -0.87
IGHV3-54-201ENST00000622166 TTC3P53804 2025 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 OR6C75A6NL08 312 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 PDLIM1O00151 329 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 SEPT4O43236 478 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 KLK8O60259 260 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 KERAO60938 352 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 OR6B1O95007 311 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 PGM3O95394 542 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 STAMBPO95630 424 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 MTHFD2P13995 350 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 ZNF37AP17032 561 aaPredicted RBP9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 PSMC3P17980 439 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 LBPP18428 481 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 TCN1P20061 433 aaPredicted RBP9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 TACR2P21452 398 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 CD9P21926 228 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 CST5P28325 142 aaPredicted RBP9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 CTGFP29279 349 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 KPNA1P52294 538 aaPredicted RBP9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 SLC7A2P52569 658 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 ATP6V0D1P61421 351 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 SH3BP2P78314 561 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 RALGDSQ12967 914 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 BNIP2Q12982 314 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 SEMA3AQ14563 771 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 OR4D1Q15615 310 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 DDR2Q16832 855 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 MYLK3Q32MK0 819 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 NADK2Q4G0N4 442 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 PABPC1LQ4VXU2 614 aaKnown RBP9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 SDHAF4Q5VUM1 108 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 CST9Q5W186 159 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 LCN8Q6JVE9 175 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 OGFOD2Q6N063 350 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 B3GNT6Q6ZMB0 384 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 RBM44Q6ZP01 1051 aaKnown RBP9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 ERMP1Q7Z2K6 904 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 EFL1Q7Z2Z2 1120 aaKnown RBP9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 SPATA19Q7Z5L4 167 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 RTN4RL1Q86UN2 441 aaPredicted RBP9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 PIM3Q86V86 326 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 RETREG3Q86VR2 466 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 CARM1Q86X55 608 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 ZNF280BQ86YH2 543 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 IFNL1Q8IU54 200 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 MIER2Q8N344 545 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 METTL25Q8N6Q8 603 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 MFSD2AQ8NA29 543 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 OR4L1Q8NH43 312 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 TWIST2Q8WVJ9 160 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 UPF1Q92900 1129 aaKnown RBP eCLIP9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 FBXO32Q969P5 355 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 KIAA1191Q96A73 305 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 EME1Q96AY2 570 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 SPATA17Q96L03 361 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 TCF12Q99081 682 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 HAUS8Q9BT25 410 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 NUSAP1Q9BXS6 441 aaKnown RBP9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 TRIM15Q9C019 465 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 DERL2Q9GZP9 239 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 MUC13Q9H3R2 512 aa9.6□□□□□ -0.87
IGHV3-54-201ENST00000622166 ZFYVE28Q9HCC9 887 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms