RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 LIMK1P53667 647 aa8.71□□□□□ -1.02
GTF2I-219ENST00000621040 RPS14P62263 151 aaKnown RBP8.71□□□□□ -1.02
GTF2I-219ENST00000621040 ZNF423Q2M1K9 1284 aa8.71□□□□□ -1.02
GTF2I-219ENST00000621040 NUDT18Q6ZVK8 323 aa8.71□□□□□ -1.02
GTF2I-219ENST00000621040 CROCCP2Q86T23 111 aa8.71□□□□□ -1.02
GTF2I-219ENST00000621040 CHSY1Q86X52 802 aa8.71□□□□□ -1.02
GTF2I-219ENST00000621040 OR2T3Q8NH03 318 aa8.71□□□□□ -1.02
GTF2I-219ENST00000621040 ARHGEF2Q92974 986 aaKnown RBP8.71□□□□□ -1.02
GTF2I-219ENST00000621040 SKA1Q96BD8 255 aa8.71□□□□□ -1.02
GTF2I-219ENST00000621040 NMD3Q96D46 503 aaKnown RBP8.71□□□□□ -1.02
GTF2I-219ENST00000621040 NSMCE3Q96MG7 304 aa8.71□□□□□ -1.02
GTF2I-219ENST00000621040 FAM118BQ9BPY3 351 aa8.71□□□□□ -1.02
GTF2I-219ENST00000621040 MAGEB5Q9BZ81 275 aa8.71□□□□□ -1.02
GTF2I-219ENST00000621040 ZYG11BQ9C0D3 744 aa8.71□□□□□ -1.02
GTF2I-219ENST00000621040 FGFR1OP2Q9NVK5 253 aa8.71□□□□□ -1.02
GTF2I-219ENST00000621040 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.71□□□□□ -1.02
GTF2I-219ENST00000621040 UVRAGQ9P2Y5 699 aa8.71□□□□□ -1.02
GTF2I-219ENST00000621040 SLC8A2Q9UPR5 921 aa8.71□□□□□ -1.02
GTF2I-219ENST00000621040 DYTNA2CJ06 578 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 FAM47E-STBD1D6RA91 191 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 GOLGA8SH3BPF8 625 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 DCLK1O15075 740 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 T-ENOLP0DO92 83 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 TCF4P15884 667 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 POLR2EP19388 210 aaKnown RBP8.7□□□□□ -1.02
GTF2I-219ENST00000621040 ENPP1P22413 925 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 IL4RP24394 825 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 FOXN2P32314 431 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 TUBA1BP68363 451 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 ARF5P84085 180 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 USP30Q70CQ3 517 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 TUBA1AQ71U36 451 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 RTL3Q8N8U3 475 aaKnown RBP8.7□□□□□ -1.02
GTF2I-219ENST00000621040 GRAMD1AQ96CP6 724 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 NUP85Q9BW27 656 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 NDFIP2Q9NV92 336 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 FAM86C1Q9NVL1 165 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 RCOR3Q9P2K3 495 aaPredicted RBP8.7□□□□□ -1.02
GTF2I-219ENST00000621040 EVLQ9UI08 416 aaPredicted RBP8.7□□□□□ -1.02
GTF2I-219ENST00000621040 R4GN57 208 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 TBC1D3BA6NDS4 549 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 LRIG2O94898 1065 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 PEX11BO96011 259 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 UBL4AP11441 157 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 HOXB2P14652 356 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 RXRGP48443 463 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 RASSF2P50749 326 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 NME3Q13232 169 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 LRP8Q14114 963 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 CCDC6Q16204 474 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 CIR1Q86X95 450 aaPredicted RBP8.7□□□□□ -1.02
GTF2I-219ENST00000621040 ARHGAP12Q8IWW6 846 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 RHOT2Q8IXI1 618 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 CFAP52Q8N1V2 620 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 FAM160A2Q8N612 972 aaPredicted RBP8.7□□□□□ -1.02
GTF2I-219ENST00000621040 EFHD2Q96C19 240 aaPredicted RBP8.7□□□□□ -1.02
GTF2I-219ENST00000621040 ZNF419Q96HQ0 510 aaPredicted RBP8.7□□□□□ -1.02
GTF2I-219ENST00000621040 MKRN2Q9H000 416 aaKnown RBP8.7□□□□□ -1.02
GTF2I-219ENST00000621040 PRM3Q9NNZ6 103 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 POLMQ9NP87 494 aaPredicted RBP8.7□□□□□ -1.02
GTF2I-219ENST00000621040 PARD6AQ9NPB6 346 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 CACNA2D2Q9NY47 1150 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 SCML1Q9UN30 329 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 LOC105371267A0A1B0GV96 52 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 TSPAN11A1L157 253 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 RASA4BC9J798 803 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 FGF10O15520 208 aaPredicted RBP8.7□□□□□ -1.02
GTF2I-219ENST00000621040 RASA4O43374 803 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 HNRNPCL1O60812 293 aaKnown RBP8.7□□□□□ -1.02
GTF2I-219ENST00000621040 RETP07949 1114 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 EPHB2P29323 1055 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 VPS41P49754 854 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 TMED10P49755 219 aaKnown RBP8.7□□□□□ -1.02
GTF2I-219ENST00000621040 NEK3P51956 506 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 METTL21CQ5VZV1 264 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 SATL1Q86VE3 508 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 FAM131BQ86XD5 332 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 LSMEM2Q8N112 164 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 CADM4Q8NFZ8 388 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 DNASE2BQ8WZ79 361 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 KCTD15Q96SI1 283 aaPredicted RBP8.7□□□□□ -1.02
GTF2I-219ENST00000621040 SELENOSQ9BQE4 189 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 NEURL2Q9BR09 285 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 MRPL47Q9HD33 250 aaKnown RBP8.7□□□□□ -1.02
GTF2I-219ENST00000621040 KLHL14Q9P2G3 628 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 OR12D3Q9UGF7 316 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 VANGL2Q9ULK5 521 aa8.7□□□□□ -1.02
GTF2I-219ENST00000621040 LAMA1P25391 3075 aa8.69□□□□□ -1.02
GTF2I-219ENST00000621040 RNASEH1O60930 286 aaKnown RBP8.69□□□□□ -1.02
GTF2I-219ENST00000621040 PSMG1O95456 288 aa8.69□□□□□ -1.02
GTF2I-219ENST00000621040 BCKDHBP21953 392 aa8.69□□□□□ -1.02
GTF2I-219ENST00000621040 RPL26P61254 145 aaKnown RBP8.69□□□□□ -1.02
GTF2I-219ENST00000621040 ECT2LQ008S8 904 aa8.69□□□□□ -1.02
GTF2I-219ENST00000621040 PIGHQ14442 188 aaPredicted RBP8.69□□□□□ -1.02
GTF2I-219ENST00000621040 TGFBIQ15582 683 aa8.69□□□□□ -1.02
GTF2I-219ENST00000621040 CA9Q16790 459 aa8.69□□□□□ -1.02
GTF2I-219ENST00000621040 DENND2CQ68D51 928 aa8.69□□□□□ -1.02
GTF2I-219ENST00000621040 TMEM214Q6NUQ4 689 aaKnown RBP8.69□□□□□ -1.02
GTF2I-219ENST00000621040 BORAQ6PGQ7 559 aa8.69□□□□□ -1.02
GTF2I-219ENST00000621040 VPS36Q86VN1 386 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms