RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 MIIPQ5JXC2 388 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 GARNL3Q5VVW2 1013 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 NIPAL1Q6NVV3 410 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 NINJ2Q9NZG7 142 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 TBX20Q9UMR3 447 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 ZC3H13Q5T200 1668 aaKnown RBP7.17□□□□□ -1.26
COLCA1-205ENST00000620864 CLCA1A8K7I4 914 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 MEN1O00255 615 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 BCKDKO14874 412 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 MID1O15344 667 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 CCNYL3P0C7X3 344 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 CBLBQ13191 982 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 PPIGQ13427 754 aaKnown RBP eCLIP7.17□□□□□ -1.26
COLCA1-205ENST00000620864 TIGD4Q8IY51 512 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 RIOK2Q9BVS4 552 aaKnown RBP7.17□□□□□ -1.26
COLCA1-205ENST00000620864 SEMA4AQ9H3S1 761 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 PCYOX1Q9UHG3 505 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 DMGDHQ9UI17 866 aaKnown RBP7.17□□□□□ -1.26
COLCA1-205ENST00000620864 PCDHA11Q9Y5I1 949 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 PMF1-BGLAPU3KQ54 211 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 RPTORQ8N122 1335 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 BTNL10A8MVZ5 291 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 B8ZZF3 427 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 CYP7B1O75881 506 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 TDP2O95551 362 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 CFIP05156 583 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 GLI1P08151 1106 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 AKR1A1P14550 325 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 S100PP25815 95 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 CRATP43155 626 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 BACE1P56817 501 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 OR2B6P58173 313 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 ATP6V0D1P61421 351 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 POU5F1Q01860 360 aaKnown RBP7.17□□□□□ -1.26
COLCA1-205ENST00000620864 SPIBQ01892 262 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 VGLL4Q14135 290 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 CA9Q16790 459 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 KLHL22Q53GT1 634 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 LIPMQ5VYY2 423 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 KATNAL2Q8IYT4 538 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 CCDC54Q8NEL0 328 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 TOR1AIP2Q8NFQ8 470 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 POLD4Q9HCU8 107 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 ARMCX1Q9P291 453 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 PCDHGB1Q9Y5G3 927 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 TAF6LQ9Y6J9 622 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 RBM47A0AV96 593 aaKnown RBP7.17□□□□□ -1.26
COLCA1-205ENST00000620864 APOC4-APOC2K7ER74 178 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 GPR182O15218 404 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 HBP1O60381 514 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 APOC2P02655 101 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 GSTT2P0CG29 244 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 EPCAMP16422 314 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 HERVK_113P62684 666 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 FAM171BQ6P995 826 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 CEP76Q8TAP6 659 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 FBXO30Q8TB52 745 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 PREX1Q8TCU6 1659 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 HTR3CQ8WXA8 447 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 ATXN3LQ9H3M9 355 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 KAT8Q9H7Z6 458 aaKnown RBP7.17□□□□□ -1.26
COLCA1-205ENST00000620864 AGPAT3Q9NRZ7 376 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 PXDNLA1KZ92 1463 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 ADAMDEC1O15204 470 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 DDX3YO15523 660 aaKnown RBP7.17□□□□□ -1.26
COLCA1-205ENST00000620864 UGT2B17O75795 530 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 VAPBO95292 243 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 NUDT14O95848 222 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 OTCP00480 354 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 FGFR1P11362 822 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 SLC6A2P23975 617 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 ERVK-24P63145 666 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 MVKQ03426 396 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 IKBKEQ14164 716 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 PON3Q15166 354 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 MARC1Q5VT66 337 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 LSM14AQ8ND56 463 aaKnown RBP7.17□□□□□ -1.26
COLCA1-205ENST00000620864 TBL1YQ9BQ87 522 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 ACE2Q9BYF1 805 aaPredicted RBP7.17□□□□□ -1.26
COLCA1-205ENST00000620864 UNKLQ9H9P5 680 aaKnown RBP7.17□□□□□ -1.26
COLCA1-205ENST00000620864 IFT46Q9NQC8 304 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 MAB21L2Q9Y586 359 aa7.17□□□□□ -1.26
COLCA1-205ENST00000620864 CAPN8A6NHC0 703 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 CXCL11O14625 94 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 AIREO43918 545 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 OR10H3O60404 316 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 MSCO60682 206 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 TIPRLO75663 272 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 PIGNO95427 931 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ADORA2AP29274 412 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 CDH5P33151 784 aaPredicted RBP7.16□□□□□ -1.26
COLCA1-205ENST00000620864 TCF7P36402 384 aaPredicted RBP7.16□□□□□ -1.26
COLCA1-205ENST00000620864 ARL3P36405 182 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 CAP2P40123 477 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 SBK1Q52WX2 424 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 CBWD3Q5JTY5 395 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 CBWD5Q5RIA9 395 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 FNBP1LQ5T0N5 605 aa7.16□□□□□ -1.26
COLCA1-205ENST00000620864 HAGHLQ6PII5 290 aaPredicted RBP7.16□□□□□ -1.26
COLCA1-205ENST00000620864 CARNMT1Q8N4J0 409 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms