RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 DSEQ9UL01 958 aa19.58■□□□□ 0.72
PDLIM3-212ENST00000620787 PCDHA9Q9Y5H5 950 aa19.58■□□□□ 0.72
PDLIM3-212ENST00000620787 PPP6CO00743 305 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 PIP5K1BO14986 540 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 AXLP30530 894 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 RAB15P59190 212 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 PCSK7Q16549 785 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 ZNF792Q3KQV3 632 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 CILP2Q8IUL8 1156 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 DDIASQ8IXT1 998 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 PPP1R2P1Q96PQ5 205 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 SLC52A3Q9NQ40 469 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 SH3BP1Q9Y3L3 701 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 LTBP3Q9NS15 1303 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 TCRBV5S2A0A599 114 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 CXCL11O14625 94 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 PTGESO14684 152 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 CDK14O94921 469 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 MATN4O95460 622 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 MTHFD1P11586 935 aaKnown RBP19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 FCGR1AP12314 374 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 HOXD8P13378 290 aaPredicted RBP19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 PORP16435 677 aaPredicted RBP19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 RFC2P35250 354 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 PSMD7P51665 324 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 WNT3AP56704 352 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 TGFBIQ15582 683 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 KDELC1Q6UW63 502 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 USP51Q70EK9 711 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 PIM3Q86V86 326 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 OR13J1Q8NGT2 312 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 DQX1Q8TE96 717 aaKnown RBP19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 TWIST2Q8WVJ9 160 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 NDFIP2Q9NV92 336 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 POLR3BQ9NW08 1133 aaPredicted RBP19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 GID8Q9NWU2 228 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 IPPQ9Y573 584 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 MRPL42Q9Y6G3 142 aaKnown RBP19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 UTRNP46939 3433 aa19.57■□□□□ 0.72
PDLIM3-212ENST00000620787 SNAP91O60641 907 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 FAM163BP0C2L3 166 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 UGT1A1P22309 533 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 UGT1A4P22310 534 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 UGT1A3P35503 534 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 UGT1A5P35504 534 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 FOXA1P55317 472 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 C21orf59P57076 290 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 CDC42EP1Q00587 391 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 BNIP3Q12983 259 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 CYP51A1Q16850 503 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 ARTNQ5T4W7 220 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 ANKRD26P1Q6NSI1 321 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 SMG8Q8ND04 991 aaKnown RBP19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 TMEM125Q96AQ2 219 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 SENP8Q96LD8 212 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 SOX17Q9H6I2 414 aaPredicted RBP19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 INPP4BO15327 924 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 FGF4P08620 206 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 ZNF12P17014 697 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 RPS9P46781 194 aaKnown RBP19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 APLP1P51693 650 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 FOXM1Q08050 763 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 FAM117BQ6P1L5 589 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 DCDC5Q6ZRR9 648 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 GALNT7Q86SF2 657 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 LDB1Q86U70 411 aaPredicted RBP19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 RPL10LQ96L21 214 aaKnown RBP19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 TUBB1Q9H4B7 451 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 SDR39U1Q9NRG7 319 aaPredicted RBP19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 TMEM9Q9P0T7 183 aa19.56■□□□□ 0.72
PDLIM3-212ENST00000620787 RRN3P2A6NIE6 340 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 COQ9O75208 318 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 ZBTB11O95625 1053 aaPredicted RBP19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 SNAP29O95721 258 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 HOXC13P31276 330 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 SLC26A3P40879 764 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 YAP1P46937 504 aaKnown RBP19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 GSK3BP49841 420 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 GRSF1Q12849 480 aaKnown RBP eCLIP19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 SPATS1Q496A3 300 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 KANK2Q63ZY3 851 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 NANOGP8Q6NSW7 305 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 CHST15Q7LFX5 561 aaPredicted RBP19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 RSPH1Q8WYR4 309 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 EXT2Q93063 718 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 BLOC1S6Q9UL45 172 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 TIMM13Q9Y5L4 95 aaPredicted RBP19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 TMEM221A6NGB7 291 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 LRRC14BA6NHZ5 514 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 AZIN1O14977 448 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 SIX3O95343 332 aaPredicted RBP19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 CPNE6O95741 557 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 S1PR4O95977 384 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 HLCSP50747 726 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 ADARB1P78563 741 aaKnown RBP19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 SNX17Q15036 470 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 NEDD8Q15843 81 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 COQ5Q5HYK3 327 aa19.55■□□□□ 0.72
PDLIM3-212ENST00000620787 IL31Q6EBC2 164 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms