RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 DPH5Q9H2P9 285 aa19.69■□□□□ 0.74
UPF3A-211ENST00000618700 XAB2Q9HCS7 855 aaKnown RBP19.69■□□□□ 0.74
UPF3A-211ENST00000618700 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.69■□□□□ 0.74
UPF3A-211ENST00000618700 IL17CQ9P0M4 197 aa19.69■□□□□ 0.74
UPF3A-211ENST00000618700 NFKBIL1Q9UBC1 381 aaPredicted RBP19.69■□□□□ 0.74
UPF3A-211ENST00000618700 EIF2B4Q9UI10 523 aaKnown RBP19.69■□□□□ 0.74
UPF3A-211ENST00000618700 SMG5Q9UPR3 1016 aaKnown RBP19.69■□□□□ 0.74
UPF3A-211ENST00000618700 SLCO1B1Q9Y6L6 691 aa19.69■□□□□ 0.74
UPF3A-211ENST00000618700 DOCK9Q9BZ29 2069 aa19.69■□□□□ 0.74
UPF3A-211ENST00000618700 GPR179Q6PRD1 2367 aa19.69■□□□□ 0.74
UPF3A-211ENST00000618700 GOLGA8MH3BSY2 632 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 NDC80O14777 642 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 WNT9AO14904 365 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 RAD51BO15315 384 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 SLC31A1O15431 190 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 LDB2O43679 373 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 PAK4O96013 591 aaPredicted RBP19.68■□□□□ 0.74
UPF3A-211ENST00000618700 SLC4A1P02730 911 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 ITPKAP23677 461 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 SPINT3P49223 89 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 ZNF140P52738 457 aaPredicted RBP19.68■□□□□ 0.74
UPF3A-211ENST00000618700 DRG2P55039 364 aaKnown RBP19.68■□□□□ 0.74
UPF3A-211ENST00000618700 PEAR1Q5VY43 1037 aaPredicted RBP19.68■□□□□ 0.74
UPF3A-211ENST00000618700 DENND2CQ68D51 928 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 ZNF765Q7L2R6 523 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 TMEM145Q8NBT3 493 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 BBOF1Q8ND07 529 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 CENPTQ96BT3 561 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 NUS1Q96E22 293 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 LOXL4Q96JB6 756 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 RANBP9Q96S59 729 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 FZD3Q9NPG1 666 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 KCTD5Q9NXV2 234 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 ARL5AQ9Y689 179 aa19.68■□□□□ 0.74
UPF3A-211ENST00000618700 RGSL1A5PLK6 1076 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 MROH6A6NGR9 719 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 PRAMEF26H0Y7S4 382 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 AVILO75366 819 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 CRTAMO95727 393 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 PSMA3P25788 255 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 MAOBP27338 520 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 AKT2P31751 481 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 NPY2RP49146 381 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 SESN2P58004 480 aaPredicted RBP19.67■□□□□ 0.74
UPF3A-211ENST00000618700 DCDC1P59894 354 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 LPAL2Q16609 132 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 NRSN1Q8IZ57 195 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 SUMF1Q8NBK3 374 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 SERAC1Q96JX3 654 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 C19orf43Q9BQ61 176 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 FRMD8Q9BZ67 464 aaPredicted RBP19.67■□□□□ 0.74
UPF3A-211ENST00000618700 IL22Q9GZX6 179 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 SEMA4AQ9H3S1 761 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 PKD2L2Q9NZM6 624 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 BFARQ9NZS9 450 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 DMGDHQ9UI17 866 aaKnown RBP19.67■□□□□ 0.74
UPF3A-211ENST00000618700 ANAPC5Q9UJX4 755 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 USP34Q70CQ2 3546 aa19.67■□□□□ 0.74
UPF3A-211ENST00000618700 GON4LQ3T8J9 2241 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 SDK1Q7Z5N4 2213 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 C2orf81A6NN90 581 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 PROB1E7EW31 1015 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 BUD23O43709 281 aaKnown RBP19.66■□□□□ 0.74
UPF3A-211ENST00000618700 PPFIA2O75334 1257 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 EPN2O95208 641 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 NUDT7P0C024 238 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 BPIP17213 487 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 LPOP22079 712 aaPredicted RBP19.66■□□□□ 0.74
UPF3A-211ENST00000618700 MGAT1P26572 445 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 HOXD12P35452 270 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 IGFALSP35858 605 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 PDE1BQ01064 536 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 DPTQ07507 201 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 CALCOCO2Q13137 446 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 MTM1Q13496 603 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 SEPT6Q14141 434 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 LRRC14Q15048 493 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 IRF4Q15306 451 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 TRADDQ15628 312 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 HENMT1Q5T8I9 393 aaKnown RBP19.66■□□□□ 0.74
UPF3A-211ENST00000618700 ARMC3Q5W041 872 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 LAIR1Q6GTX8 287 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 GCNT7Q6ZNI0 430 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 AGGF1Q8N302 714 aaeCLIP19.66■□□□□ 0.74
UPF3A-211ENST00000618700 SLC6A18Q96N87 628 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 CDH19Q9H159 772 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 ABCG8Q9H221 673 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 TM9SF3Q9HD45 589 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 MBNL1Q9NR56 388 aaKnown RBP19.66■□□□□ 0.74
UPF3A-211ENST00000618700 SYBUQ9NX95 663 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 PILRBQ9UKJ0 227 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 RAB23Q9ULC3 237 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 TCAF1Q9Y4C2 921 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 KCTD3Q9Y597 815 aa19.66■□□□□ 0.74
UPF3A-211ENST00000618700 ZNF106Q9H2Y7 1883 aaKnown RBP19.66■□□□□ 0.74
UPF3A-211ENST00000618700 ESYT3A0FGR9 886 aa19.65■□□□□ 0.74
UPF3A-211ENST00000618700 HEATR9A2RTY3 570 aa19.65■□□□□ 0.74
UPF3A-211ENST00000618700 GOLGA8CPA6NN73 597 aa19.65■□□□□ 0.74
UPF3A-211ENST00000618700 ADRA1DP25100 572 aa19.65■□□□□ 0.74
UPF3A-211ENST00000618700 CRADDP78560 199 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms