RNA–Protein interactions for RNA: ENST00000618515.4

KIF3A-208, Transcript of kinesin family member 3A, humanhuman

TSL 5 BASIC

Gene KIF3A, Length 3,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-208ENST00000618515 CCDC138Q96M89 665 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 ZMAT2Q96NC0 199 aaKnown RBP13.09□□□□□ -0.31
KIF3A-208ENST00000618515 ERVK-6Q9BXR3 956 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 EIF2AQ9BY44 585 aaKnown RBP13.09□□□□□ -0.31
KIF3A-208ENST00000618515 CDHR5Q9HBB8 845 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 AKIP1Q9NQ31 210 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 OSER1Q9NX31 292 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 USE1Q9NZ43 259 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 ANAPC2Q9UJX6 822 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 RNF103-CHMP3A0A140T963 221 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 FAM72CH0Y354 149 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 CNOT3O75175 753 aaKnown RBP13.09□□□□□ -0.31
KIF3A-208ENST00000618515 KATNA1O75449 491 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 PTPN2P17706 415 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 NELFEP18615 380 aaKnown RBP13.09□□□□□ -0.31
KIF3A-208ENST00000618515 MATN1P21941 496 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 FSCN1Q16658 493 aaKnown RBP13.09□□□□□ -0.31
KIF3A-208ENST00000618515 UNC50Q53HI1 259 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 FAM72AQ5TYM5 149 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 FAM72DQ6L9T8 149 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 FAM72BQ86X60 149 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 PJA1Q8NG27 643 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 TRAPPC12Q8WVT3 735 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 SNX19Q92543 992 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 FEM1AQ9BSK4 669 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 BDH2Q9BUT1 245 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 CNGB3Q9NQW8 809 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 CPQQ9Y646 472 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 PATJQ8NI35 1801 aa13.09□□□□□ -0.31
KIF3A-208ENST00000618515 C16orf96A6NNT2 1141 aa13.08□□□□□ -0.31
KIF3A-208ENST00000618515 HNRNPLP14866 589 aaKnown RBP eCLIP13.08□□□□□ -0.31
KIF3A-208ENST00000618515 ALDH3A2P51648 485 aa13.08□□□□□ -0.31
KIF3A-208ENST00000618515 ADIGQ0VDE8 80 aa13.08□□□□□ -0.31
KIF3A-208ENST00000618515 BNIP3Q12983 259 aa13.08□□□□□ -0.31
KIF3A-208ENST00000618515 FBXO47Q5MNV8 452 aa13.08□□□□□ -0.31
KIF3A-208ENST00000618515 RANBP10Q6VN20 620 aa13.08□□□□□ -0.31
KIF3A-208ENST00000618515 PTAR1Q7Z6K3 402 aaPredicted RBP13.08□□□□□ -0.31
KIF3A-208ENST00000618515 SPPL2CQ8IUH8 684 aa13.08□□□□□ -0.31
KIF3A-208ENST00000618515 AADATQ8N5Z0 425 aa13.08□□□□□ -0.31
KIF3A-208ENST00000618515 RHEBL1Q8TAI7 183 aa13.08□□□□□ -0.31
KIF3A-208ENST00000618515 SLC2A14Q8TDB8 520 aa13.08□□□□□ -0.31
KIF3A-208ENST00000618515 USP33Q8TEY7 942 aa13.08□□□□□ -0.31
KIF3A-208ENST00000618515 FBLIM1Q8WUP2 373 aa13.08□□□□□ -0.31
KIF3A-208ENST00000618515 CHAC2Q8WUX2 184 aa13.08□□□□□ -0.31
KIF3A-208ENST00000618515 ZNF566Q969W8 418 aa13.08□□□□□ -0.31
KIF3A-208ENST00000618515 C18orf25Q96B23 403 aaPredicted RBP13.08□□□□□ -0.31
KIF3A-208ENST00000618515 AKTIPQ9H8T0 292 aa13.08□□□□□ -0.31
KIF3A-208ENST00000618515 GLOD4Q9HC38 313 aa13.08□□□□□ -0.31
KIF3A-208ENST00000618515 ANKHQ9HCJ1 492 aa13.08□□□□□ -0.31
KIF3A-208ENST00000618515 FBXO8Q9NRD0 319 aa13.08□□□□□ -0.31
KIF3A-208ENST00000618515 A0A1W2PP18 115 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 EI24O14681 340 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 PPEF2O14830 753 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 LDLRP01130 860 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 ITIH1P19827 911 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 KCNA5P22460 613 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 JAK1P23458 1154 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 AVPR1AP37288 418 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 AFMIDQ63HM1 303 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 XKR5Q6UX68 686 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 IGFN1Q86VF2 1251 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 GALNT13Q8IUC8 556 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 DENND6AQ8IWF6 608 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 MUL1Q969V5 352 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 ISG20Q96AZ6 181 aaKnown RBP13.08□□□□□ -0.32
KIF3A-208ENST00000618515 PGLYRP2Q96PD5 576 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 ALPK1Q96QP1 1244 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 C1QTNF3Q9BXJ4 246 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 BRINP2Q9C0B6 783 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 SPATC1LQ9H0A9 340 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 NEU3Q9UQ49 428 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 CLDN25C9JDP6 229 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 MRPS14O60783 128 aaKnown RBP13.08□□□□□ -0.32
KIF3A-208ENST00000618515 HDCP19113 662 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 CAPN3P20807 821 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 ADORA2BP29275 332 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 SLC12A2P55011 1212 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 EIF4EBP2Q13542 120 aaPredicted RBP13.08□□□□□ -0.32
KIF3A-208ENST00000618515 ARMCX2Q7L311 632 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 PEX13Q92968 403 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 SH3YL1Q96HL8 342 aaPredicted RBP13.08□□□□□ -0.32
KIF3A-208ENST00000618515 FBXL20Q96IG2 436 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 GLT1D1Q96MS3 346 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 RAD21L1Q9H4I0 556 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 HPS4Q9NQG7 708 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 PCDHGA11Q9Y5H2 935 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 GPR45Q9Y5Y3 372 aa13.08□□□□□ -0.32
KIF3A-208ENST00000618515 GPC6Q9Y625 555 aaPredicted RBP13.08□□□□□ -0.32
KIF3A-208ENST00000618515 OAS3Q9Y6K5 1087 aaKnown RBP13.08□□□□□ -0.32
KIF3A-208ENST00000618515 SHROOM3Q8TF72 1996 aa13.07□□□□□ -0.32
KIF3A-208ENST00000618515 I6L893 689 aaPredicted RBP13.07□□□□□ -0.32
KIF3A-208ENST00000618515 SLC7A4O43246 635 aa13.07□□□□□ -0.32
KIF3A-208ENST00000618515 XPOTO43592 962 aaKnown RBP13.07□□□□□ -0.32
KIF3A-208ENST00000618515 CDH1P12830 882 aa13.07□□□□□ -0.32
KIF3A-208ENST00000618515 NCAM1P13591 858 aa13.07□□□□□ -0.32
KIF3A-208ENST00000618515 INSRRP14616 1297 aa13.07□□□□□ -0.32
KIF3A-208ENST00000618515 CRHBPP24387 322 aa13.07□□□□□ -0.32
KIF3A-208ENST00000618515 ACVR2AP27037 513 aa13.07□□□□□ -0.32
KIF3A-208ENST00000618515 MAP4P27816 1152 aaKnown RBP13.07□□□□□ -0.32
KIF3A-208ENST00000618515 POLR2IP36954 125 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms