RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 NPY6RQ99463 290 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 PTPRHQ9HD43 1115 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 KCNK4Q9NYG8 393 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 GULP1Q9UBP9 304 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 HAO1Q9UJM8 370 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 EIF4E1BA6NMX2 242 aaKnown RBP9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 FCHO1O14526 889 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 MT-CYBP00156 380 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 PROZP22891 400 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 C2orf27AQ580R0 203 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 C17orf64Q86WR6 236 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 VPS50Q96JG6 964 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 KCTD14Q9BQ13 255 aaPredicted RBP9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 SUV39H2Q9H5I1 410 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 RXFP1Q9HBX9 757 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 LRRC4CQ9HCJ2 640 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 CACNA2D2Q9NY47 1150 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 SLC12A4Q9UP95 1085 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 WNT6Q9Y6F9 365 aa9.44□□□□□ -0.9
CLTCL1-208ENST00000615606 EDDM13A0A1B0GTR0 161 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 SH3BGRLO75368 114 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 TM7SF2O76062 418 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 CFHP08603 1231 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 GNA13Q14344 377 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 WLSQ5T9L3 541 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 SCUBE1Q8IWY4 988 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 SLC44A1Q8WWI5 657 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 USP7Q93009 1102 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 MTFMTQ96DP5 389 aaKnown RBP9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 TRMOQ9BU70 441 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 NMUR1Q9HB89 426 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 MTRRQ9UBK8 725 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 IL36AQ9UHA7 158 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 GJD2Q9UKL4 321 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 MRASO14807 208 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 SLC7A4O43246 635 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 RASGRP1O95267 797 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 TIE1P35590 1138 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 BLKP51451 505 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 RALGPS1Q5JS13 557 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 LDLRAP1Q5SW96 308 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 GDPD4Q6W3E5 623 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 RHBGQ9H310 441 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 RABGEF1Q9UJ41 708 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 PIPSLA2A3N6 862 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 ZNF682O95780 498 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 RHOP08100 348 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 OGNP20774 298 aaKnown RBP9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 MPP5Q8N3R9 675 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 STX19Q8N4C7 294 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 ZNF513Q8N8E2 541 aaPredicted RBP9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 CKAP2Q8WWK9 683 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 CENPTQ96BT3 561 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 CEP295NLQ96MC4 621 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 MIOSQ9NXC5 875 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 GNSP15586 552 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 PTGER3P43115 390 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 NEK3P51956 506 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 OCA2Q04671 838 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 SEMA5AQ13591 1074 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 AP5B1Q2VPB7 878 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 ITPRIPL2Q3MIP1 535 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 PLA2G4EQ3MJ16 856 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 ZC3H12BQ5HYM0 836 aaKnown RBP9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 NCBP2-AS2Q69YL0 99 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 MSANTD2Q6P1R3 559 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 TTC27Q6P3X3 843 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 BRAT1Q6PJG6 821 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 TAF8Q7Z7C8 310 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 EFCAB3Q8N7B9 438 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 OR2AP1Q8NGE2 309 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 SIPA1Q96FS4 1042 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 DNAJC1Q96KC8 554 aaKnown RBP9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 ADNPQ9H2P0 1102 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 RAP2CQ9Y3L5 183 aa9.43□□□□□ -0.9
CLTCL1-208ENST00000615606 SLC31A1O15431 190 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 ESR1P03372 595 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 TYRP14679 529 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 IL1R2P27930 398 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 MS4A13Q5J8X5 152 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 FBXW10Q5XX13 1052 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 SERPINA9Q86WD7 417 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 CMTM8Q8IZV2 173 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 DCAF4L2Q8NA75 395 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 TADA1Q96BN2 335 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 ZNF514Q96K75 400 aaPredicted RBP9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 NECTIN4Q96NY8 510 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 NR1H4Q96RI1 486 aaPredicted RBP9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 NKX2-4Q9H2Z4 354 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 OAZ2O95190 189 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 C2P06681 752 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 FCGR1AP12314 374 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 CCND1P24385 295 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 PTPN4P29074 926 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 CAPZA2P47755 286 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 DGKEP52429 567 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 CYGBQ8WWM9 190 aa9.42□□□□□ -0.9
CLTCL1-208ENST00000615606 CD101Q93033 1021 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms