RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 GPD2P43304 727 aa10.38□□□□□ -0.75
TNFAIP3-208ENST00000615468 IL5RAQ01344 420 aa10.38□□□□□ -0.75
TNFAIP3-208ENST00000615468 CHRNEQ04844 493 aa10.38□□□□□ -0.75
TNFAIP3-208ENST00000615468 TRAF3Q13114 568 aa10.38□□□□□ -0.75
TNFAIP3-208ENST00000615468 HABP4Q5JVS0 413 aaKnown RBP10.38□□□□□ -0.75
TNFAIP3-208ENST00000615468 XYLT1Q86Y38 959 aa10.38□□□□□ -0.75
TNFAIP3-208ENST00000615468 MFSD4AQ8N468 514 aa10.38□□□□□ -0.75
TNFAIP3-208ENST00000615468 FAR1Q8WVX9 515 aa10.38□□□□□ -0.75
TNFAIP3-208ENST00000615468 EXT2Q93063 718 aa10.38□□□□□ -0.75
TNFAIP3-208ENST00000615468 TMEM143Q96AN5 459 aa10.38□□□□□ -0.75
TNFAIP3-208ENST00000615468 BIRC7Q96CA5 298 aa10.38□□□□□ -0.75
TNFAIP3-208ENST00000615468 HEXIM2Q96MH2 286 aaKnown RBP10.38□□□□□ -0.75
TNFAIP3-208ENST00000615468 ELP3Q9H9T3 547 aa10.38□□□□□ -0.75
TNFAIP3-208ENST00000615468 TRMT13Q9NUP7 481 aaKnown RBP10.38□□□□□ -0.75
TNFAIP3-208ENST00000615468 COX16Q9P0S2 106 aa10.38□□□□□ -0.75
TNFAIP3-208ENST00000615468 GABBR1Q9UBS5 961 aa10.38□□□□□ -0.75
TNFAIP3-208ENST00000615468 CYTH4Q9UIA0 394 aa10.38□□□□□ -0.75
TNFAIP3-208ENST00000615468 TIMM44O43615 452 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 XPNPEP2O43895 674 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 NOBOXO60393 691 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 DLX3O60479 287 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 UPK1BO75841 260 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 TPPPO94811 219 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 CRHBPP24387 322 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 PSMB4P28070 264 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 SERPINH1P50454 418 aaKnown RBP10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 BNIP2Q12982 314 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 NAB1Q13506 487 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 FRG1Q14331 258 aaKnown RBP10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 ARHGEF6Q15052 776 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 ADPRMQ3LIE5 342 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 ATAD3CQ5T2N8 411 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 TBPL2Q6SJ96 375 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 LYSMD2Q8IV50 215 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 SULF1Q8IWU6 871 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 SMG8Q8ND04 991 aaKnown RBP10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 FAM83FQ8NEG4 500 aaPredicted RBP10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 OR13J1Q8NGT2 312 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 HCAR2Q8TDS4 363 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 NSUN6Q8TEA1 469 aaKnown RBP10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 MFSD3Q96ES6 412 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 NAT9Q9BTE0 207 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 RUBCNLQ9H714 662 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 SP140LQ9H930 580 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 PTPRHQ9HD43 1115 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 TMEM181Q9P2C4 612 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 CD300AQ9UGN4 299 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 FBXO40Q9UH90 709 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 WBP11Q9Y2W2 641 aaKnown RBP10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 FAM25AB3EWG3 89 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 FAM25CB3EWG5 89 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 FAM25GB3EWG6 89 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 COL4A5P29400 1685 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 SDC4P31431 198 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 HADHAP40939 763 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 GJA9P57773 515 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 BOLA3Q53S33 107 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 FAM219BQ5XKK7 198 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 RAP1GAP2Q684P5 730 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 CLEC6AQ6EIG7 209 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 LYPD8Q6UX82 237 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 TFAP2DQ7Z6R9 452 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 OR8H2Q8N162 312 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 RHOXF1Q8NHV9 184 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 RASSF5Q8WWW0 418 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 HTR3CQ8WXA8 447 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 JPH3Q8WXH2 748 aaPredicted RBP10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 RMDN1Q96DB5 314 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 MAP6Q96JE9 813 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 BEX2Q9BXY8 128 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 CHST12Q9NRB3 414 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 KLHL8Q9P2G9 620 aaPredicted RBP10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 ACOT9Q9Y305 439 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 A0A0J9YYE9 177 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 CPNE3O75131 537 aaKnown RBP10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 SOAT2O75908 522 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 STMN1P16949 149 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 CES1P23141 567 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 RFC2P35250 354 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 ACADSBP45954 432 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 MAP2K4P45985 399 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 GRM3Q14832 879 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 C6orf141Q5SZD1 244 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 HORMAD1Q86X24 394 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 TBC1D21Q8IYX1 336 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 SVOPQ8N4V2 548 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 KDM1BQ8NB78 822 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 BEST2Q8NFU1 509 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 OR5H6Q8NGV6 325 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 TRIB2Q92519 343 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 CGRRF1Q99675 332 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 SNRNP25Q9BV90 132 aaKnown RBP10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 BTBD3Q9Y2F9 522 aa10.37□□□□□ -0.75
TNFAIP3-208ENST00000615468 ZW10O43264 779 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 LRIG2O94898 1065 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 JUNBP17275 347 aaPredicted RBP10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 SLC26A2P50443 739 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 ST13P50502 369 aaKnown RBP10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 PLIN5Q00G26 463 aa10.36□□□□□ -0.75
TNFAIP3-208ENST00000615468 NFYCQ13952 458 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms