RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 SSTR1P30872 391 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 GKP32189 559 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 EPHB1P54762 984 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 GRSF1Q12849 480 aaKnown RBP eCLIP11.46□□□□□ -0.57
SLIRP-212ENST00000613856 STAT4Q14765 748 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 HSF5Q4G112 596 aaPredicted RBP11.46□□□□□ -0.57
SLIRP-212ENST00000613856 FBXO43Q4G163 708 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 ANKRD20A4Q4UJ75 823 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 BRAT1Q6PJG6 821 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 C3orf62Q6ZUJ4 267 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 TRMT11Q7Z4G4 463 aaKnown RBP11.46□□□□□ -0.57
SLIRP-212ENST00000613856 CROCCP2Q86T23 111 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 ZNF513Q8N8E2 541 aaPredicted RBP11.46□□□□□ -0.57
SLIRP-212ENST00000613856 TMIEQ8NEW7 156 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 BRSK1Q8TDC3 778 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 PDCD6IPQ8WUM4 868 aaKnown RBP11.46□□□□□ -0.57
SLIRP-212ENST00000613856 OR8D1Q8WZ84 308 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 ZNF669Q96BR6 464 aaPredicted RBP11.46□□□□□ -0.57
SLIRP-212ENST00000613856 MCCC1Q96RQ3 725 aaPredicted RBP11.46□□□□□ -0.57
SLIRP-212ENST00000613856 LYSMD1Q96S90 227 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 GABRG3Q99928 467 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 C19orf43Q9BQ61 176 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 TRABDQ9H4I3 376 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 FBRSQ9HAH7 460 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 TREX1Q9NSU2 369 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.46□□□□□ -0.57
SLIRP-212ENST00000613856 PHTF1Q9UMS5 762 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 STON1Q9Y6Q2 735 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 RPS6KL1Q9Y6S9 549 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 FAM169AQ9Y6X4 670 aa11.46□□□□□ -0.57
SLIRP-212ENST00000613856 ITPR1Q14643 2758 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 ZCWPW2A0A1B0GU75 182 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 LDB2O43679 373 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 BNIP3LO60238 219 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 LEFTY1O75610 366 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 CRTAMO95727 393 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 C1QAP02745 245 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 CTSLP07711 333 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 HLA-EP13747 358 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 NFKBIAP25963 317 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 IRX4P78413 519 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 MRPS21P82921 87 aaKnown RBP11.45□□□□□ -0.58
SLIRP-212ENST00000613856 PDE1BQ01064 536 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 ACVR1Q04771 509 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 ZNF844Q08AG5 666 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 NAB1Q13506 487 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 CAMK2GQ13555 558 aaPredicted RBP11.45□□□□□ -0.58
SLIRP-212ENST00000613856 SEPT6Q14141 434 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 TAF1AQ15573 450 aaPredicted RBP11.45□□□□□ -0.58
SLIRP-212ENST00000613856 KLHL38Q2WGJ6 581 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 UAP1L1Q3KQV9 507 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 ZNF805Q5CZA5 627 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 TSTD2Q5T7W7 516 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 KIAA0930Q6ICG6 404 aaPredicted RBP11.45□□□□□ -0.58
SLIRP-212ENST00000613856 CAPN12Q6ZSI9 719 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 DSG4Q86SJ6 1040 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 ZSWIM9Q86XI8 627 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 CHPFQ8IZ52 775 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 NDUFAF2Q8N183 169 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 ZNF366Q8N895 744 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.45□□□□□ -0.58
SLIRP-212ENST00000613856 RPLP0P6Q8NHW5 317 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 GRIN3AQ8TCU5 1115 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 BLOC1S5Q8TDH9 187 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 FBF1Q8TES7 1133 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 RUFY1Q96T51 708 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 CYTH2Q99418 400 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 ACOX2Q99424 681 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 CCDC77Q9BR77 488 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 TRIM56Q9BRZ2 755 aaKnown RBP11.45□□□□□ -0.58
SLIRP-212ENST00000613856 TPSD1Q9BZJ3 242 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 ROPN1BQ9BZX4 212 aaPredicted RBP11.45□□□□□ -0.58
SLIRP-212ENST00000613856 MTG2Q9H4K7 406 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 ROPN1Q9HAT0 212 aaPredicted RBP11.45□□□□□ -0.58
SLIRP-212ENST00000613856 MAGEE1Q9HCI5 957 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 PRSS16Q9NQE7 514 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 FSCN3Q9NQT6 498 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 CHRAC1Q9NRG0 131 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 CACNA2D2Q9NY47 1150 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 MOCS1Q9NZB8 636 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 RABGEF1Q9UJ41 708 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 PPM1HQ9ULR3 514 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 SPO11Q9Y5K1 396 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 PI4KAP42356 2102 aa11.45□□□□□ -0.58
SLIRP-212ENST00000613856 CCDC163A0A0D9SF12 145 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 SPAARA0A1B0GVQ0 90 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 FAM159BA6NKW6 160 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 C1QTNF3-AMACRE9PGA6 284 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 SHBGP04278 402 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 PRKCGP05129 697 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 EPHX1P07099 455 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 C7P10643 843 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 PAMP19021 973 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 ITGB7P26010 798 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 NMBRP28336 390 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 NTSR1P30989 418 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 SUOXP51687 545 aa11.44□□□□□ -0.58
SLIRP-212ENST00000613856 ZNF140P52738 457 aaPredicted RBP11.44□□□□□ -0.58
SLIRP-212ENST00000613856 POLR2LP62875 67 aaKnown RBP11.44□□□□□ -0.58
SLIRP-212ENST00000613856 IFFO1Q0D2I5 559 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms