RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 OXSR1O95747 527 aaPredicted RBP21.95■■□□□ 1.11
POLR2J3-220ENST00000613744 GRIA4P48058 902 aa21.95■■□□□ 1.11
POLR2J3-220ENST00000613744 CSE1LP55060 971 aaKnown RBP21.95■■□□□ 1.11
POLR2J3-220ENST00000613744 RTP2Q5QGT7 225 aa21.95■■□□□ 1.11
POLR2J3-220ENST00000613744 PELI3Q8N2H9 469 aa21.95■■□□□ 1.11
POLR2J3-220ENST00000613744 C12orf29Q8N999 325 aa21.95■■□□□ 1.11
POLR2J3-220ENST00000613744 TAMM41Q96BW9 452 aa21.95■■□□□ 1.11
POLR2J3-220ENST00000613744 PCDHAC1Q9H158 963 aa21.95■■□□□ 1.11
POLR2J3-220ENST00000613744 CCM2LQ9NUG4 571 aaPredicted RBP21.95■■□□□ 1.11
POLR2J3-220ENST00000613744 NLRC5Q86WI3 1866 aa21.95■■□□□ 1.1
POLR2J3-220ENST00000613744 CKMT2P17540 419 aa21.95■■□□□ 1.1
POLR2J3-220ENST00000613744 DNAJB2P25686 324 aa21.95■■□□□ 1.1
POLR2J3-220ENST00000613744 MAP4P27816 1152 aaKnown RBP21.95■■□□□ 1.1
POLR2J3-220ENST00000613744 CCDC14Q49A88 953 aa21.95■■□□□ 1.1
POLR2J3-220ENST00000613744 SH3PXD2AQ5TCZ1 1133 aa21.95■■□□□ 1.1
POLR2J3-220ENST00000613744 PPP2R2DQ66LE6 453 aa21.95■■□□□ 1.1
POLR2J3-220ENST00000613744 DHFR2Q86XF0 187 aa21.95■■□□□ 1.1
POLR2J3-220ENST00000613744 OR13F1Q8NGS4 319 aa21.95■■□□□ 1.1
POLR2J3-220ENST00000613744 RAB2BQ8WUD1 216 aa21.95■■□□□ 1.1
POLR2J3-220ENST00000613744 AUTS2Q8WXX7 1259 aa21.95■■□□□ 1.1
POLR2J3-220ENST00000613744 FEM1CQ96JP0 617 aa21.95■■□□□ 1.1
POLR2J3-220ENST00000613744 ZNF347Q96SE7 839 aa21.95■■□□□ 1.1
POLR2J3-220ENST00000613744 ACE2Q9BYF1 805 aaPredicted RBP21.95■■□□□ 1.1
POLR2J3-220ENST00000613744 CACNA2D2Q9NY47 1150 aa21.95■■□□□ 1.1
POLR2J3-220ENST00000613744 TMEM181Q9P2C4 612 aa21.95■■□□□ 1.1
POLR2J3-220ENST00000613744 TCAF1Q9Y4C2 921 aa21.95■■□□□ 1.1
POLR2J3-220ENST00000613744 VWA8A3KMH1 1905 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 AQP12BA6NM10 295 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 PFDN6O15212 129 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 LTFP02788 710 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 CYP2F1P24903 491 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 GPD2P43304 727 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 HLCSP50747 726 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 SQLEQ14534 574 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 ZNF846Q147U1 533 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 TMEM198Q66K66 360 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 TRNP1Q6NT89 227 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 PRSS55Q6UWB4 352 aaPredicted RBP21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 KCTD8Q6ZWB6 473 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 AQP12AQ8IXF9 295 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 TTC39CQ8N584 583 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 AGR3Q8TD06 166 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 SLC45A3Q96JT2 553 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 SNRNP25Q9BV90 132 aaKnown RBP21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 FAM49BQ9NUQ9 324 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 ZDHHC2Q9UIJ5 367 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 PCDHB8Q9UN66 801 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 TMX2-CTNND1H3BSU7 103 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 CA8P35219 290 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 CYP2A13Q16696 494 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 C15orf59Q2T9L4 293 aaPredicted RBP21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 C6orf10Q5SRN2 563 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 FSTL4Q6MZW2 842 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 C8orf82Q6P1X6 216 aaPredicted RBP21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 TTC30BQ8N4P2 665 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 HTR3CQ8WXA8 447 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 TSNARE1Q96NA8 513 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 SLC28A3Q9HAS3 691 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 MRM3Q9HC36 420 aaKnown RBP21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 CPQQ9Y646 472 aa21.94■■□□□ 1.1
POLR2J3-220ENST00000613744 CROCCQ5TZA2 2017 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 PRORSD1PA6NEY8 169 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 KCNU1A8MYU2 1149 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 C2P06681 752 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 PABPC1P11940 636 aaKnown RBP21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 PPM1AP35813 382 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 YWHAHQ04917 246 aaPredicted RBP21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 TRAF2Q12933 501 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 ITGADQ13349 1161 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 RAB30Q15771 203 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 ATP6AP1Q15904 470 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 REP15Q6BDI9 236 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 OVOS1Q6IE37 1185 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 CYP2U1Q7Z449 544 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 LIMS2Q7Z4I7 341 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 SPRED1Q7Z699 444 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 IGFN1Q86VF2 1251 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 ADAM32Q8TC27 787 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 FAR2Q96K12 515 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 TMEM209Q96SK2 561 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 PKD2L2Q9NZM6 624 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 PLXNA4Q9HCM2 1894 aa21.93■■□□□ 1.1
POLR2J3-220ENST00000613744 J3QRK9 145 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 NPHS1O60500 1241 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 TIPRLO75663 272 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 ERVK-10P10266 1014 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 CSRP3P50461 194 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 SESN2P58004 480 aaPredicted RBP21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 VARS2Q5ST30 1063 aaKnown RBP21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 KIAA1841Q6NSI8 718 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 STRA8Q7Z7C7 330 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 METTL23Q86XA0 190 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 CBR4Q8N4T8 237 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 PCDH20Q8N6Y1 951 aaKnown RBP21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 FBXL8Q96CD0 374 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 NRBF2Q96F24 287 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 TTPALQ9BTX7 342 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 LRRC40Q9H9A6 602 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 LRRC4Q9HBW1 653 aa21.92■■□□□ 1.1
POLR2J3-220ENST00000613744 SYBUQ9NX95 663 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms