RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 SIM2Q14190 667 aaPredicted RBP12.39□□□□□ -0.43
HLCS-207ENST00000612277 ARSHQ5FYA8 562 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 BRINP3Q76B58 766 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 RIOX2Q8IUF8 465 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 SPPL2CQ8IUH8 684 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 MCOLN2Q8IZK6 566 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 RFKQ969G6 155 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 PLEKHA1Q9HB21 404 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 ETNK2Q9NVF9 386 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 TRPV2Q9Y5S1 764 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 CYB561D2O14569 222 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 FFAR3O14843 346 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 GPR42O15529 346 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 RAMP2O60895 175 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 SLC22A3O75751 556 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 SHBGP04278 402 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 NUMBP49757 651 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 S100A10P60903 97 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 BST1Q10588 318 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 RPA4Q13156 261 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 AUHQ13825 339 aaKnown RBP12.39□□□□□ -0.43
HLCS-207ENST00000612277 MFSD10Q14728 455 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 TBRG1Q3YBR2 411 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 NCCRP1Q6ZVX7 275 aaPredicted RBP12.39□□□□□ -0.43
HLCS-207ENST00000612277 BPIFB1Q8TDL5 484 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 MXRA8Q9BRK3 442 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 ZNF649Q9BS31 505 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 MTIF3Q9H2K0 278 aaKnown RBP12.39□□□□□ -0.43
HLCS-207ENST00000612277 SNTG1Q9NSN8 517 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 BICRAQ9NZM4 1560 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 FADS2P1A8MWK0 482 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 PAPSS2O95340 614 aaPredicted RBP12.39□□□□□ -0.43
HLCS-207ENST00000612277 CATP04040 527 aaKnown RBP12.39□□□□□ -0.43
HLCS-207ENST00000612277 ABHD2P08910 425 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 LINC00032P0C843 101 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 GNALP38405 381 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 RPS9P46781 194 aaKnown RBP12.39□□□□□ -0.43
HLCS-207ENST00000612277 CLCN5P51795 746 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 MYL6P60660 151 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 USP41Q3LFD5 358 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 PPP1R15BQ5SWA1 713 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 NIPAL1Q6NVV3 410 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 XKRXQ6PP77 449 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 ZNF517Q6ZMY9 492 aaPredicted RBP12.39□□□□□ -0.43
HLCS-207ENST00000612277 ZFP3Q96NJ6 502 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 DPAGT1Q9H3H5 408 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 TRPS1Q9UHF7 1281 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 CLCA1A8K7I4 914 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 EFCAB9A8MZ26 197 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 HBP1O60381 514 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 OTCP00480 354 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 MAGEA8P43361 318 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 GABRB2P47870 512 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 PDX1P52945 283 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 UAP1L1Q3KQV9 507 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 PTPN20Q4JDL3 420 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 ATP13A4Q4VNC1 1196 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 NSMCE3Q96MG7 304 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 USP21Q9UK80 565 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 PDE10AQ9Y233 779 aa12.39□□□□□ -0.43
HLCS-207ENST00000612277 IGSF6O95976 241 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 OR3A3P47888 321 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 OR3A2P47893 321 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 RD3Q7Z3Z2 195 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 LHFPL3Q86UP9 236 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 CLIP4Q8N3C7 705 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 SDR16C5Q8N3Y7 309 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 LZTR1Q8N653 840 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 VANGL1Q8TAA9 524 aaPredicted RBP12.38□□□□□ -0.43
HLCS-207ENST00000612277 ACMSDQ8TDX5 336 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 CCDC120Q96HB5 630 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 TUBB1Q9H4B7 451 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 DNPEPQ9ULA0 475 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 A8MUI8 341 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 TNFRSF11BO00300 401 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 PER2O15055 1255 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 GSC2O15499 205 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 HOXC8P31273 242 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 USP30Q70CQ3 517 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 SPATA19Q7Z5L4 167 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 APOBEC3FQ8IUX4 373 aaKnown RBP12.38□□□□□ -0.43
HLCS-207ENST00000612277 SVOPLQ8N434 492 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 SLC37A3Q8NCC5 494 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 TNFRSF25Q93038 417 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 VAT1Q99536 393 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 IL22Q9GZX6 179 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 ARHGAP20Q9P2F6 1191 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 ADGRL2O95490 1459 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 PNPLA7Q6ZV29 1317 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 TSPAN3O60637 253 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 CCNB1P14635 433 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 VARSP26640 1264 aaKnown RBP12.38□□□□□ -0.43
HLCS-207ENST00000612277 MECP2P51608 486 aaKnown RBP12.38□□□□□ -0.43
HLCS-207ENST00000612277 PPP3CAQ08209 521 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 ABRQ12979 859 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 AIMP2Q13155 320 aaKnown RBP12.38□□□□□ -0.43
HLCS-207ENST00000612277 COLEC12Q5KU26 742 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 ZDHHC17Q8IUH5 632 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 PHC3Q8NDX5 983 aa12.38□□□□□ -0.43
HLCS-207ENST00000612277 OR52K1Q8NGK4 314 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms