RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 BBS5Q8N3I7 341 aa24.36■■□□□ 1.49
CDKN3-211ENST00000611205 PGBD5Q8N414 524 aa24.36■■□□□ 1.49
CDKN3-211ENST00000611205 PTCD2Q8WV60 388 aaKnown RBP24.36■■□□□ 1.49
CDKN3-211ENST00000611205 DTD2Q96FN9 168 aa24.36■■□□□ 1.49
CDKN3-211ENST00000611205 NUDT22Q9BRQ3 303 aa24.36■■□□□ 1.49
CDKN3-211ENST00000611205 FRMD8Q9BZ67 464 aaPredicted RBP24.36■■□□□ 1.49
CDKN3-211ENST00000611205 NOD2Q9HC29 1040 aa24.36■■□□□ 1.49
CDKN3-211ENST00000611205 ETNK2Q9NVF9 386 aa24.36■■□□□ 1.49
CDKN3-211ENST00000611205 TRNAU1APQ9NX07 287 aaKnown RBP24.36■■□□□ 1.49
CDKN3-211ENST00000611205 PHTF1Q9UMS5 762 aa24.36■■□□□ 1.49
CDKN3-211ENST00000611205 SCINQ9Y6U3 715 aa24.36■■□□□ 1.49
CDKN3-211ENST00000611205 MYO18BQ8IUG5 2567 aa24.36■■□□□ 1.49
CDKN3-211ENST00000611205 A0A1W2PQC6 194 aa24.35■■□□□ 1.49
CDKN3-211ENST00000611205 ZW10O43264 779 aa24.35■■□□□ 1.49
CDKN3-211ENST00000611205 ITGB2P05107 769 aa24.35■■□□□ 1.49
CDKN3-211ENST00000611205 CCL4P13236 92 aa24.35■■□□□ 1.49
CDKN3-211ENST00000611205 CR2P20023 1033 aa24.35■■□□□ 1.49
CDKN3-211ENST00000611205 LHCGRP22888 699 aa24.35■■□□□ 1.49
CDKN3-211ENST00000611205 TRAF2Q12933 501 aa24.35■■□□□ 1.49
CDKN3-211ENST00000611205 TMCO3Q6UWJ1 677 aa24.35■■□□□ 1.49
CDKN3-211ENST00000611205 ZNF571Q7Z3V5 609 aaPredicted RBP24.35■■□□□ 1.49
CDKN3-211ENST00000611205 C17orf82Q86X59 251 aaPredicted RBP24.35■■□□□ 1.49
CDKN3-211ENST00000611205 PATE1Q8WXA2 126 aa24.35■■□□□ 1.49
CDKN3-211ENST00000611205 JPH3Q8WXH2 748 aaPredicted RBP24.35■■□□□ 1.49
CDKN3-211ENST00000611205 SPOCK2Q92563 424 aa24.35■■□□□ 1.49
CDKN3-211ENST00000611205 HSPH1Q92598 858 aa24.35■■□□□ 1.49
CDKN3-211ENST00000611205 COL26A1Q96A83 441 aa24.35■■□□□ 1.49
CDKN3-211ENST00000611205 NPIPB15A6NHN6 443 aaPredicted RBP24.34■■□□□ 1.49
CDKN3-211ENST00000611205 WISP1O95388 367 aa24.34■■□□□ 1.49
CDKN3-211ENST00000611205 GZMAP12544 262 aa24.34■■□□□ 1.49
CDKN3-211ENST00000611205 CD82P27701 267 aa24.34■■□□□ 1.49
CDKN3-211ENST00000611205 POLD2P49005 469 aa24.34■■□□□ 1.49
CDKN3-211ENST00000611205 PTPRRQ15256 657 aa24.34■■□□□ 1.49
CDKN3-211ENST00000611205 DOK6Q6PKX4 331 aa24.34■■□□□ 1.49
CDKN3-211ENST00000611205 Q6ZVL8 140 aa24.34■■□□□ 1.49
CDKN3-211ENST00000611205 DTX1Q86Y01 620 aa24.34■■□□□ 1.49
CDKN3-211ENST00000611205 ATPAF2Q8N5M1 289 aa24.34■■□□□ 1.49
CDKN3-211ENST00000611205 NSMCE1Q8WV22 266 aa24.34■■□□□ 1.49
CDKN3-211ENST00000611205 MGME1Q9BQP7 344 aa24.34■■□□□ 1.49
CDKN3-211ENST00000611205 TRIM4Q9C037 500 aa24.34■■□□□ 1.49
CDKN3-211ENST00000611205 PSMD11O00231 422 aa24.33■■□□□ 1.49
CDKN3-211ENST00000611205 PEX11BO96011 259 aa24.33■■□□□ 1.49
CDKN3-211ENST00000611205 FAM87AP0C7U9 286 aa24.33■■□□□ 1.49
CDKN3-211ENST00000611205 CTPS1P17812 591 aa24.33■■□□□ 1.49
CDKN3-211ENST00000611205 WT1P19544 449 aaPredicted RBP24.33■■□□□ 1.49
CDKN3-211ENST00000611205 IL1R2P27930 398 aa24.33■■□□□ 1.49
CDKN3-211ENST00000611205 CYP4F2P78329 520 aa24.33■■□□□ 1.49
CDKN3-211ENST00000611205 NFKB2Q00653 900 aa24.33■■□□□ 1.49
CDKN3-211ENST00000611205 CTBSQ01459 385 aa24.33■■□□□ 1.49
CDKN3-211ENST00000611205 DPYSL2Q16555 572 aa24.33■■□□□ 1.49
CDKN3-211ENST00000611205 XKR5Q6UX68 686 aa24.33■■□□□ 1.49
CDKN3-211ENST00000611205 ZNF574Q6ZN55 896 aaPredicted RBP24.33■■□□□ 1.49
CDKN3-211ENST00000611205 ZNF438Q7Z4V0 828 aa24.33■■□□□ 1.49
CDKN3-211ENST00000611205 POLNQ7Z5Q5 900 aa24.33■■□□□ 1.49
CDKN3-211ENST00000611205 TSPAN33Q86UF1 283 aa24.33■■□□□ 1.49
CDKN3-211ENST00000611205 CCDC74BQ96LY2 380 aa24.33■■□□□ 1.49
CDKN3-211ENST00000611205 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.33■■□□□ 1.49
CDKN3-211ENST00000611205 CD84Q9UIB8 345 aa24.33■■□□□ 1.49
CDKN3-211ENST00000611205 IGHV5-10-1A0A0J9YXX1 117 aa24.32■■□□□ 1.48
CDKN3-211ENST00000611205 DDX3XO00571 662 aaKnown RBP eCLIP24.32■■□□□ 1.485e-7■■■□□ 16.9
CDKN3-211ENST00000611205 HGSO14964 777 aaPredicted RBP24.32■■□□□ 1.48
CDKN3-211ENST00000611205 MAFKO60675 156 aa24.32■■□□□ 1.48
CDKN3-211ENST00000611205 TCF4P15884 667 aa24.32■■□□□ 1.48
CDKN3-211ENST00000611205 PCK1P35558 622 aa24.32■■□□□ 1.48
CDKN3-211ENST00000611205 MMP13P45452 471 aa24.32■■□□□ 1.48
CDKN3-211ENST00000611205 GPR1P46091 355 aa24.32■■□□□ 1.48
CDKN3-211ENST00000611205 KLHL30Q0D2K2 578 aa24.32■■□□□ 1.48
CDKN3-211ENST00000611205 NR1D2Q14995 579 aa24.32■■□□□ 1.48
CDKN3-211ENST00000611205 ARMC12Q5T9G4 340 aa24.32■■□□□ 1.48
CDKN3-211ENST00000611205 E4F1Q66K89 784 aaPredicted RBP24.32■■□□□ 1.48
CDKN3-211ENST00000611205 USP45Q70EL2 814 aa24.32■■□□□ 1.48
CDKN3-211ENST00000611205 NAGSQ8N159 534 aa24.32■■□□□ 1.48
CDKN3-211ENST00000611205 SCRN2Q96FV2 425 aa24.32■■□□□ 1.48
CDKN3-211ENST00000611205 MRPL47Q9HD33 250 aaKnown RBP24.32■■□□□ 1.48
CDKN3-211ENST00000611205 RTN4Q9NQC3 1192 aaKnown RBP24.32■■□□□ 1.48
CDKN3-211ENST00000611205 ST14Q9Y5Y6 855 aa24.32■■□□□ 1.48
CDKN3-211ENST00000611205 A0A0U1RQS6 177 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 STMND1H3BQB6 276 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 PGLSO95336 258 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 IVLP07476 585 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 CD1CP29017 333 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 ADCY8P40145 1251 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 ACTR1BP42025 376 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 ACTR1AP61163 376 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 PEX6Q13608 980 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 TBR1Q16650 682 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 CLPPQ16740 277 aaPredicted RBP24.31■■□□□ 1.48
CDKN3-211ENST00000611205 BOLA3Q53S33 107 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 MARC1Q5VT66 337 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 NKAIN2Q5VXU1 208 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 CBARPQ8N350 705 aaPredicted RBP24.31■■□□□ 1.48
CDKN3-211ENST00000611205 TRIM11Q96F44 468 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 GBP4Q96PP9 640 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 CSPG4P5Q96PW8 444 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 B3GNT4Q9C0J1 378 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 ZMYND15Q9H091 742 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 CDH19Q9H159 772 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 SLC17A4Q9Y2C5 497 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 PLEKHM1Q9Y4G2 1056 aa24.31■■□□□ 1.48
CDKN3-211ENST00000611205 PPM1DO15297 605 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms