RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 GOLGA6DP0CG33 693 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 MYBL1P10243 752 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 RARAP10276 462 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 LIPCP11150 499 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 NFKBIAP25963 317 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 ANP32AP39687 249 aaKnown RBP13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 GNPDA1P46926 289 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 POLD2P49005 469 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 ILF3Q12906 894 aaKnown RBP eCLIP13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 LINC00303Q3SY05 128 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 MARC1Q5VT66 337 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 TXNRD3NBQ6F5E7 133 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 ZNF574Q6ZN55 896 aaPredicted RBP13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 C17orf82Q86X59 251 aaPredicted RBP13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 BBS5Q8N3I7 341 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 EXD3Q8N9H8 876 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 NSMCE1Q8WV22 266 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 PTCD2Q8WV60 388 aaKnown RBP13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 SGF29Q96ES7 293 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 TRIM11Q96F44 468 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 DTD2Q96FN9 168 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 SCRN2Q96FV2 425 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 CSPG4P5Q96PW8 444 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 MGME1Q9BQP7 344 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 FRMD8Q9BZ67 464 aaPredicted RBP13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 TRNAU1APQ9NX07 287 aaKnown RBP13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 GOLGA6AQ9NYA3 693 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 SEPT10Q9P0V9 454 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 TAAR2Q9P1P5 351 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 SUFUQ9UMX1 484 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 ST14Q9Y5Y6 855 aa13.37□□□□□ -0.27
POLR2J3-219ENST00000608621 TENM4Q6N022 2769 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 A0A0U1RQS6 177 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 A0A1W2PQC6 194 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 NPIPB15A6NHN6 443 aaPredicted RBP13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 PGLSO95336 258 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 CPNE6O95741 557 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 CTPS1P17812 591 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 LHCGRP22888 699 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 MMP13P45452 471 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 CDK3Q00526 305 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 CTBSQ01459 385 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 PIGHQ14442 188 aaPredicted RBP13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 C16orf72Q14CZ0 275 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 MAP9Q49MG5 647 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 MANEAQ5SRI9 462 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 ARMC12Q5T9G4 340 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 RAET1GQ6H3X3 334 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 SLC30A9Q6PML9 568 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 TECPR1Q7Z6L1 1165 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 TSPAN33Q86UF1 283 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 PATE1Q8WXA2 126 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 BPIFA3Q9BQP9 254 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 PCDH18Q9HCL0 1135 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 FOXJ2Q9P0K8 574 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 TMEM63CQ9P1W3 806 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 PPIL1Q9Y3C6 166 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 PLEKHM1Q9Y4G2 1056 aa13.36□□□□□ -0.27
POLR2J3-219ENST00000608621 A0A1B0GTH6 734 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 C9orf172C9J069 976 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 PYCARD-AS1I3L0S3 204 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 PSMD11O00231 422 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 PPM1DO15297 605 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 MBD3O95983 291 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 PDHA1P08559 390 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 CCL4P13236 92 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 CD1CP29017 333 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 ADCY8P40145 1251 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 GPR1P46091 355 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 CDH6P55285 790 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 ITKQ08881 620 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 BIRC2Q13490 618 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 NR1I3Q14994 352 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 RALGPS1Q5JS13 557 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 RFLNAQ6ZTI6 216 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 ZNF438Q7Z4V0 828 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 VASH2Q86V25 355 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 DTX1Q86Y01 620 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 NAGSQ8N159 534 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 ATPAF2Q8N5M1 289 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 RCBTB1Q8NDN9 531 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 PIH1D2Q8WWB5 315 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 EXTL1Q92935 676 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 BTBD6Q96KE9 485 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 SMIM14Q96QK8 99 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 MCCC1Q96RQ3 725 aaPredicted RBP13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 NUDT22Q9BRQ3 303 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 ABCG8Q9H221 673 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 NT5MQ9NPB1 228 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 AKAP7Q9P0M2 348 aaPredicted RBP13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 CD84Q9UIB8 345 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 SLC17A4Q9Y2C5 497 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 TMEM98Q9Y2Y6 226 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 PCDHB11Q9Y5F2 797 aa13.35□□□□□ -0.27
POLR2J3-219ENST00000608621 IGHV5-10-1A0A0J9YXX1 117 aa13.34□□□□□ -0.27
POLR2J3-219ENST00000608621 ZW10O43264 779 aa13.34□□□□□ -0.27
POLR2J3-219ENST00000608621 SLC28A2O43868 658 aa13.34□□□□□ -0.27
POLR2J3-219ENST00000608621 IVLP07476 585 aa13.34□□□□□ -0.27
POLR2J3-219ENST00000608621 IL4RP24394 825 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms