RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 ARRB1P49407 418 aaPredicted RBP14.24□□□□□ -0.13
CTSA-219ENST00000607841 THOP1P52888 689 aa14.24□□□□□ -0.13
CTSA-219ENST00000607841 DPTQ07507 201 aa14.24□□□□□ -0.13
CTSA-219ENST00000607841 SPARCL1Q14515 664 aa14.24□□□□□ -0.13
CTSA-219ENST00000607841 INPP5AQ14642 412 aa14.24□□□□□ -0.13
CTSA-219ENST00000607841 HLA-BQ31612 363 aa14.24□□□□□ -0.13
CTSA-219ENST00000607841 ZDHHC20Q5W0Z9 365 aa14.24□□□□□ -0.13
CTSA-219ENST00000607841 PNCKQ6P2M8 343 aa14.24□□□□□ -0.13
CTSA-219ENST00000607841 GLT6D1Q7Z4J2 308 aa14.24□□□□□ -0.13
CTSA-219ENST00000607841 PRUNE1Q86TP1 453 aa14.24□□□□□ -0.13
CTSA-219ENST00000607841 MINDY1Q8N5J2 469 aa14.24□□□□□ -0.13
CTSA-219ENST00000607841 GLIS1Q8NBF1 620 aa14.24□□□□□ -0.13
CTSA-219ENST00000607841 OR13H1Q8NG92 308 aa14.24□□□□□ -0.13
CTSA-219ENST00000607841 BLOC1S5Q8TDH9 187 aa14.24□□□□□ -0.13
CTSA-219ENST00000607841 AP2M1Q96CW1 435 aa14.24□□□□□ -0.13
CTSA-219ENST00000607841 APOL2Q9BQE5 337 aa14.24□□□□□ -0.13
CTSA-219ENST00000607841 FAM83DQ9H4H8 585 aa14.24□□□□□ -0.13
CTSA-219ENST00000607841 GAREM1Q9H706 876 aa14.24□□□□□ -0.13
CTSA-219ENST00000607841 SPO11Q9Y5K1 396 aa14.24□□□□□ -0.13
CTSA-219ENST00000607841 SPAG17Q6Q759 2223 aa14.24□□□□□ -0.13
CTSA-219ENST00000607841 A0A0U1RQS6 177 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.23□□□□□ -0.13
CTSA-219ENST00000607841 C2orf81A6NN90 581 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 AP3B1O00203 1094 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 CACNB4O00305 520 aaPredicted RBP14.23□□□□□ -0.13
CTSA-219ENST00000607841 PDE2AO00408 941 aaPredicted RBP14.23□□□□□ -0.13
CTSA-219ENST00000607841 YKT6O15498 198 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 USP12O75317 370 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 PPFIA2O75334 1257 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 SUN1O94901 812 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 CRTAMO95727 393 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 SLC4A1P02730 911 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 APRTP07741 180 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 HOXC4P09017 264 aaPredicted RBP14.23□□□□□ -0.13
CTSA-219ENST00000607841 KELP23276 732 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 TEAD1P28347 426 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 HMGCLP35914 325 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 LIMK1P53667 647 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 BASP1P80723 227 aaKnown RBP14.23□□□□□ -0.13
CTSA-219ENST00000607841 PDE1BQ01064 536 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 BNC1Q01954 994 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 PDE1CQ14123 709 aaPredicted RBP14.23□□□□□ -0.13
CTSA-219ENST00000607841 RAET1GQ6H3X3 334 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 PPP1R21Q6ZMI0 780 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 DNAAF3Q8N9W5 541 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 BRSK1Q8TDC3 778 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 NETO1Q8TDF5 533 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 ELF4Q99607 663 aaPredicted RBP14.23□□□□□ -0.13
CTSA-219ENST00000607841 APOOQ9BUR5 198 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 ABCG8Q9H221 673 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 EIF2B3Q9NR50 452 aaKnown RBP14.23□□□□□ -0.13
CTSA-219ENST00000607841 GPR27Q9NS67 375 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 DNAAF2Q9NVR5 837 aaKnown RBP14.23□□□□□ -0.13
CTSA-219ENST00000607841 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.23□□□□□ -0.13
CTSA-219ENST00000607841 PKP3Q9Y446 797 aa14.23□□□□□ -0.13
CTSA-219ENST00000607841 SDK1Q7Z5N4 2213 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.22□□□□□ -0.13
CTSA-219ENST00000607841 SPTY2D1-AS1A0A0U1RR47 76 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 CDX4O14627 284 aaPredicted RBP14.22□□□□□ -0.13
CTSA-219ENST00000607841 GDF9O60383 454 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 ZNF883P0CG24 379 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 TRIM23P36406 574 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 GPR1P46091 355 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 CDK16Q00536 496 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 CDH17Q12864 832 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 GPS1Q13098 491 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 SLC14A1Q13336 389 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 SUZ12Q15022 739 aaKnown RBP14.22□□□□□ -0.13
CTSA-219ENST00000607841 PPP1R7Q15435 360 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 TAF1AQ15573 450 aaPredicted RBP14.22□□□□□ -0.13
CTSA-219ENST00000607841 TRIP13Q15645 432 aaPredicted RBP14.22□□□□□ -0.13
CTSA-219ENST00000607841 ZNF423Q2M1K9 1284 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 STPG1Q5TH74 334 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 DENND5AQ6IQ26 1287 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 PARGQ86W56 976 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 SPATS2Q86XZ4 545 aaKnown RBP14.22□□□□□ -0.13
CTSA-219ENST00000607841 SLC22A18ASQ8N1D0 253 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 PLA2G15Q8NCC3 412 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 SLCO2A1Q92959 643 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 DDX47Q9H0S4 455 aaKnown RBP14.22□□□□□ -0.13
CTSA-219ENST00000607841 WDR26Q9H7D7 661 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 PHPT1Q9NRX4 125 aaPredicted RBP14.22□□□□□ -0.13
CTSA-219ENST00000607841 RXFP3Q9NSD7 469 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 PCYOX1Q9UHG3 505 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 CD84Q9UIB8 345 aa14.22□□□□□ -0.13
CTSA-219ENST00000607841 TNRC6BQ9UPQ9 1833 aaKnown RBP14.22□□□□□ -0.13
CTSA-219ENST00000607841 OTOGLQ3ZCN5 2332 aa14.21□□□□□ -0.13
CTSA-219ENST00000607841 A0A1B0GTQ1 180 aa14.21□□□□□ -0.13
CTSA-219ENST00000607841 C4orf47A7E2U8 309 aa14.21□□□□□ -0.13
CTSA-219ENST00000607841 AURKAO14965 403 aa14.21□□□□□ -0.13
CTSA-219ENST00000607841 STX7O15400 261 aaKnown RBP14.21□□□□□ -0.13
CTSA-219ENST00000607841 LPOP22079 712 aaPredicted RBP14.21□□□□□ -0.13
CTSA-219ENST00000607841 RXRGP48443 463 aa14.21□□□□□ -0.13
CTSA-219ENST00000607841 VPS41P49754 854 aa14.21□□□□□ -0.13
CTSA-219ENST00000607841 CCT8P50990 548 aa14.21□□□□□ -0.13
CTSA-219ENST00000607841 KIAA1024LP59773 190 aa14.21□□□□□ -0.13
CTSA-219ENST00000607841 DCDC1P59894 354 aa14.21□□□□□ -0.13
CTSA-219ENST00000607841 SARNPP82979 210 aaKnown RBP14.21□□□□□ -0.13
CTSA-219ENST00000607841 OLIG2Q13516 323 aa14.21□□□□□ -0.13
CTSA-219ENST00000607841 LAMB3Q13751 1172 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms