RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 C1GALT1C1Q96EU7 318 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 XKR8Q9H6D3 395 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 FRMPD4Q14CM0 1322 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 H7C0S8 307 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 FFAR3O14843 346 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 GPR42O15529 346 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 YES1P07947 543 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 ENPEPQ07075 957 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 ST3GAL1Q11201 340 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 TMEM119Q4V9L6 283 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 XKR5Q6UX68 686 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 OR2T34Q8NGX1 318 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 OR2T3Q8NH03 318 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 DNAJB3Q8WWF6 145 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 BRD7Q9NPI1 651 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 TRHDEQ9UKU6 1024 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 PRPF19Q9UMS4 504 aaKnown RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 PCDHB12Q9Y5F1 795 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 MAU2Q9Y6X3 613 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 PLOD2O00469 737 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 RGS14O43566 566 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 GNG2P59768 71 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 ILF2Q12905 390 aaKnown RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 MAMLD1Q13495 774 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 FAM92BQ6ZTR7 304 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 PRMT6Q96LA8 375 aaPredicted RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 H3BRB1 525 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 ECDO95905 644 aaPredicted RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 IFNGR2P38484 337 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 HTR2BP41595 481 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 SETMARQ53H47 684 aaPredicted RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 CNSTQ6PJW8 725 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 DET1Q7L5Y6 550 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 ILDR1Q86SU0 546 aaPredicted RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 NT5DC4Q86YG4 428 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 CLHC1Q8NHS4 586 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 FEM1AQ9BSK4 669 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 RTFDC1Q9BY42 306 aaPredicted RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 CDH19Q9H159 772 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 TUT1Q9H6E5 874 aaKnown RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 SPATA31A1Q5TZJ5 1347 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 EDF1O60869 148 aaKnown RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 CLPXO76031 633 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 ZNF7P17097 686 aaPredicted RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 PIK3CGP48736 1102 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 NTRK3Q16288 839 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 POM121L1PQ3SYA9 428 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 DUS1LQ6P1R4 473 aaKnown RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 GPN1Q9HCN4 374 aaPredicted RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 NDOR1Q9UHB4 597 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 A0A087X0B3 334 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 KPNA3O00505 521 aaPredicted RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 AP3D1O14617 1153 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 PAEPP09466 180 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 SLC6A3Q01959 620 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 METTL7BQ6UX53 244 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 ART4Q93070 314 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 MPSTP25325 297 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 ENTPD1P49961 510 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 PRKAA2P54646 552 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 SLC12A3P55017 1021 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 HLA-DQA1Q5Y7H0 255 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 PTCHD4Q6ZW05 846 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 ZDHHC6Q9H6R6 413 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 C3orf18Q9UK00 162 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 E5RJQ4 531 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 THEGLP0DJG4 465 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 YAP1P46937 504 aaKnown RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 CDH8P55286 799 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 SLC39A12Q504Y0 691 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 NPNTQ6UXI9 565 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 CEP295NLQ96MC4 621 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 HACD1B0YJ81 288 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 TISP43B9A030 160 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 RBAK-RBAKDNI3L0D1 243 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 CHADO15335 359 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 SERPINA3P01011 423 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 ACSM2AQ08AH3 577 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 ACSM2BQ68CK6 577 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 TRAPPC5Q8IUR0 188 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 OR52K1Q8NGK4 314 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 ST14Q9Y5Y6 855 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 APC2O95996 2303 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 CHD2O14647 1828 aaKnown RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 F8VP50 259 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 APOC4-APOC2K7ER74 178 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 SCAMP3O14828 347 aaKnown RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 SMAD9O15198 467 aaKnown RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 APOC2P02655 101 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 KCNA5P22460 613 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 TCEA1P23193 301 aaKnown RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 PLD1Q13393 1074 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 VPS72Q15906 364 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 RALGPS2Q86X27 583 aaPredicted RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 ZC3H7AQ8IWR0 971 aaKnown RBP8.7□□□□□ -1.02
CSMD1-216ENST00000602557 C4orf19Q8IY42 314 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 RAB2BQ8WUD1 216 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 VCPIP1Q96JH7 1222 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 SERPINB11Q96P15 392 aa8.7□□□□□ -1.02
CSMD1-216ENST00000602557 GAD1Q99259 594 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms