RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 HOXD11P31277 338 aaPredicted RBP13.72□□□□□ -0.21
VRK3-219ENST00000600137 HMGCLP35914 325 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 MAGEA6P43360 314 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 LMNB2Q03252 620 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 OVGP1Q12889 678 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 ARHGEF7Q14155 803 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 INPP5AQ14642 412 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 SHBQ15464 509 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 ZNF423Q2M1K9 1284 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 PRAMEF14Q5SWL7 426 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 DENND2CQ68D51 928 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 CCDC70Q6NSX1 233 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 ESRP1Q6NXG1 681 aaKnown RBP13.72□□□□□ -0.21
VRK3-219ENST00000600137 PNCKQ6P2M8 343 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 C4orf22Q6V702 233 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 ZNF572Q7Z3I7 529 aaPredicted RBP13.72□□□□□ -0.21
VRK3-219ENST00000600137 NRSN1Q8IZ57 195 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 GPR161Q8N6U8 529 aaKnown RBP13.72□□□□□ -0.21
VRK3-219ENST00000600137 CCDC89Q8N998 374 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 GPR26Q8NDV2 337 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 FAM174AQ8TBP5 190 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 KLHDC7BQ96G42 594 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 NUSAP1Q9BXS6 441 aaKnown RBP13.72□□□□□ -0.21
VRK3-219ENST00000600137 LRRC40Q9H9A6 602 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 IL21RQ9HBE5 538 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 IL17CQ9P0M4 197 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 CNOT6Q9ULM6 557 aaKnown RBP13.72□□□□□ -0.21
VRK3-219ENST00000600137 KCTD3Q9Y597 815 aa13.72□□□□□ -0.21
VRK3-219ENST00000600137 ARID1BQ8NFD5 2236 aaPredicted RBP13.72□□□□□ -0.21
VRK3-219ENST00000600137 RGSL1A5PLK6 1076 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 A6NNZ2 444 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 ERI2A8K979 691 aaKnown RBP13.71□□□□□ -0.21
VRK3-219ENST00000600137 FPGTO14772 594 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 LDB2O43679 373 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 TPH1P17752 444 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 PSMA3P25788 255 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 TEAD1P28347 426 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 YPEL5P62699 121 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 MTM1Q13496 603 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 FZD2Q14332 565 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 KCNJ11Q14654 390 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 PTPRCAPQ14761 206 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 TEAD4Q15561 434 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 HLA-BQ31612 363 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 HENMT1Q5T8I9 393 aaKnown RBP13.71□□□□□ -0.21
VRK3-219ENST00000600137 KCTD16Q68DU8 428 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 ZNF534Q76KX8 674 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 ZNF765Q7L2R6 523 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 GSTA5Q7RTV2 222 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 KIAA2013Q8IYS2 634 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 SPATA4Q8NEY3 305 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 OR52K1Q8NGK4 314 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 NUS1Q96E22 293 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 SRPK1Q96SB4 655 aaKnown RBP13.71□□□□□ -0.21
VRK3-219ENST00000600137 APOOQ9BUR5 198 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 LGR4Q9BXB1 951 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 FSD1LQ9BXM9 530 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 ZDHHC5Q9C0B5 715 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 TRABDQ9H4I3 376 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 ERVMER34-1Q9H9K5 563 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 CASS4Q9NQ75 786 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 PIH1D1Q9NWS0 290 aaKnown RBP13.71□□□□□ -0.21
VRK3-219ENST00000600137 KCTD5Q9NXV2 234 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 HACD3Q9P035 362 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 NFKBIL1Q9UBC1 381 aaPredicted RBP13.71□□□□□ -0.21
VRK3-219ENST00000600137 CD84Q9UIB8 345 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 KLF15Q9UIH9 416 aa13.71□□□□□ -0.21
VRK3-219ENST00000600137 TDRD6O60522 2096 aaKnown RBP13.71□□□□□ -0.21
VRK3-219ENST00000600137 SPTBN4Q9H254 2564 aa13.71□□□□□ -0.22
VRK3-219ENST00000600137 GOLGA6L10A0A0M3HER8 536 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 SPTY2D1-AS1A0A0U1RR47 76 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 CCDC188H7C350 402 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 GAPDHSO14556 408 aaPredicted RBP13.7□□□□□ -0.22
VRK3-219ENST00000600137 TOR1BO14657 336 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 TM4SF5O14894 197 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 BUD23O43709 281 aaKnown RBP13.7□□□□□ -0.22
VRK3-219ENST00000600137 FUCA1P04066 466 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 TUBB4AP04350 444 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 HOXC4P09017 264 aaPredicted RBP13.7□□□□□ -0.22
VRK3-219ENST00000600137 BPIP17213 487 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 CA5AP35218 305 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 ACTN2P35609 894 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 PAFAH1B1P43034 410 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 RABIFP47224 123 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 RXRGP48443 463 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 GPS1Q13098 491 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 EIF2B5Q13144 721 aaKnown RBP13.7□□□□□ -0.22
VRK3-219ENST00000600137 ANKRD22Q5VYY1 191 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 DBX2Q6ZNG2 339 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 BRSK1Q8TDC3 778 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 BLOC1S5Q8TDH9 187 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 CPT1BQ92523 772 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 HINFPQ9BQA5 517 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 RIOK2Q9BVS4 552 aaKnown RBP13.7□□□□□ -0.22
VRK3-219ENST00000600137 C1QTNF7Q9BXJ2 289 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 TEX101Q9BY14 249 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 GPR63Q9BZJ6 419 aa13.7□□□□□ -0.22
VRK3-219ENST00000600137 EIF2B3Q9NR50 452 aaKnown RBP13.7□□□□□ -0.22
VRK3-219ENST00000600137 DNAAF2Q9NVR5 837 aaKnown RBP13.7□□□□□ -0.22
VRK3-219ENST00000600137 FEZ2Q9UHY8 353 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms