RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 RUNDC3BQ96NL0 473 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 IL12RB2Q99665 862 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 CNOT10Q9H9A5 744 aaKnown RBP12.11□□□□□ -0.47
ZNF548-209ENST00000598895 CHKBQ9Y259 395 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 CEP250Q9BV73 2442 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 NPIPB15A6NHN6 443 aaPredicted RBP12.1□□□□□ -0.47
ZNF548-209ENST00000598895 FAM107AO95990 144 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 ITGAVP06756 1048 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 ZNF883P0CG24 379 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 EPHA8P29322 1005 aaPredicted RBP12.1□□□□□ -0.47
ZNF548-209ENST00000598895 HSD17B3P37058 310 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 NR2C2P49116 596 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 ARRB1P49407 418 aaPredicted RBP12.1□□□□□ -0.47
ZNF548-209ENST00000598895 EPHB1P54762 984 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 SIM1P81133 766 aaPredicted RBP12.1□□□□□ -0.47
ZNF548-209ENST00000598895 MRPS25P82663 173 aaKnown RBP12.1□□□□□ -0.47
ZNF548-209ENST00000598895 OVGP1Q12889 678 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 DHX34Q14147 1143 aaKnown RBP12.1□□□□□ -0.47
ZNF548-209ENST00000598895 LRRC14Q15048 493 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 PRKD1Q15139 912 aaPredicted RBP12.1□□□□□ -0.47
ZNF548-209ENST00000598895 PCSK7Q16549 785 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 RALGPS1Q5JS13 557 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 LIPIQ6XZB0 460 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 KYAT3Q6YP21 454 aaKnown RBP12.1□□□□□ -0.47
ZNF548-209ENST00000598895 BBS12Q6ZW61 710 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 TSPAN33Q86UF1 283 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 TAX1BP1Q86VP1 789 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 PACS2Q86VP3 889 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 LPCAT1Q8NF37 534 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 ZNF473Q8WTR7 871 aaKnown RBP12.1□□□□□ -0.47
ZNF548-209ENST00000598895 TFB1MQ8WVM0 346 aaKnown RBP12.1□□□□□ -0.47
ZNF548-209ENST00000598895 SEC14L1Q92503 715 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 FATE1Q969F0 183 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 CENPTQ96BT3 561 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 HES6Q96HZ4 224 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 LENG8Q96PV6 779 aaPredicted RBP12.1□□□□□ -0.47
ZNF548-209ENST00000598895 RBM15Q96T37 977 aaKnown RBP eCLIP12.1□□□□□ -0.47
ZNF548-209ENST00000598895 C1QTNF7Q9BXJ2 289 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 TDRD1Q9BXT4 1180 aaKnown RBP12.1□□□□□ -0.47
ZNF548-209ENST00000598895 OSBPL8Q9BZF1 889 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 FAM129AQ9BZQ8 928 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 CARD9Q9H257 536 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 ACTR5Q9H9F9 607 aaPredicted RBP12.1□□□□□ -0.47
ZNF548-209ENST00000598895 HAUS2Q9NVX0 235 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 DNAJC28Q9NX36 388 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 PCOLCE2Q9UKZ9 415 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 PHTF1Q9UMS5 762 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 HS3ST3A1Q9Y663 406 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 CACNA1EQ15878 2313 aa12.1□□□□□ -0.47
ZNF548-209ENST00000598895 ASCC3Q8N3C0 2202 aaKnown RBP12.1□□□□□ -0.47
ZNF548-209ENST00000598895 SPTBN4Q9H254 2564 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 A0A1W2PQ67 120 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 ESYT3A0FGR9 886 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 MIF4GDA9UHW6 222 aaKnown RBP12.09□□□□□ -0.47
ZNF548-209ENST00000598895 H7C0C1 242 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 DDX3YO15523 660 aaKnown RBP12.09□□□□□ -0.47
ZNF548-209ENST00000598895 FLRT2O43155 660 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 DFNA5O60443 496 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 RECQL5O94762 991 aaPredicted RBP12.09□□□□□ -0.47
ZNF548-209ENST00000598895 MMP2P08253 660 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 CYP2A6P11509 494 aaPredicted RBP12.09□□□□□ -0.47
ZNF548-209ENST00000598895 CEACAM1P13688 526 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 GM2AP17900 193 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 LHCGRP22888 699 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 PTPN3P26045 913 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 VIPR1P32241 457 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 HNF1BP35680 557 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 RABIFP47224 123 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 ATP5OP48047 213 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 ATP1A2P50993 1020 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 THOP1P52888 689 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 OTUD4Q01804 1114 aaKnown RBP12.09□□□□□ -0.47
ZNF548-209ENST00000598895 FZD2Q14332 565 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 GALNT3Q14435 633 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 SUZ12Q15022 739 aaKnown RBP12.09□□□□□ -0.47
ZNF548-209ENST00000598895 TRIP6Q15654 476 aaKnown RBP12.09□□□□□ -0.47
ZNF548-209ENST00000598895 CNGA3Q16281 694 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 WSCD2Q2TBF2 565 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 CCDC157Q569K6 752 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 KCTD16Q68DU8 428 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 ALG1LQ6GMV1 187 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 BZW1Q7L1Q6 419 aaKnown RBP12.09□□□□□ -0.47
ZNF548-209ENST00000598895 EID2Q8N6I1 236 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 UBL4BQ8N7F7 174 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 PLA2G15Q8NCC3 412 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 DENND6BQ8NEG7 585 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 SPATA22Q8NHS9 363 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 PIH1D2Q8WWB5 315 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 ASB12Q8WXK4 309 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 BRD8Q9H0E9 1235 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 PCDH9Q9HC56 1237 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 UBP1Q9NZI7 540 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 AMACRQ9UHK6 382 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 OR1A2Q9Y585 309 aa12.09□□□□□ -0.47
ZNF548-209ENST00000598895 APOC4-APOC2K7ER74 178 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 SCAMP1O15126 338 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 FFAR2O15552 330 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 PCDHGA12O60330 932 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 FZD6O60353 706 aa12.08□□□□□ -0.48
ZNF548-209ENST00000598895 MT-CYBP00156 380 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms