RNA–Protein interactions for RNA: ENST00000596638.1

SIN3B-208, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 5

Gene SIN3B, Length 1,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-208ENST00000596638 FGF4P08620 206 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 LTA4HP09960 611 aaKnown RBP8.6□□□□□ -1.03
SIN3B-208ENST00000596638 LINC00271P0C7V0 271 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 HOXB8P17481 243 aaPredicted RBP8.6□□□□□ -1.03
SIN3B-208ENST00000596638 IMPDH1P20839 514 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 IL10P22301 178 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 MAGEA8P43361 318 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 CCR10P46092 362 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 TAS2R39P59534 338 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 ATP6V0D1P61421 351 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 NAA20P61599 178 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 NFKB2Q00653 900 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 MGAT3Q09327 533 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 GRSF1Q12849 480 aaKnown RBP eCLIP8.6□□□□□ -1.03
SIN3B-208ENST00000596638 GRIK2Q13002 908 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 ACAP2Q15057 778 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 GRIK4Q16099 956 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 AGKQ53H12 422 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 C6orf10Q5SRN2 563 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 FAM72AQ5TYM5 149 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 LCN8Q6JVE9 175 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 KRT80Q6KB66 452 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 FAM72DQ6L9T8 149 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 PAOXQ6QHF9 649 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 CLEC20AQ6ZU45 233 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 LARP4Q71RC2 724 aaKnown RBP eCLIP8.6□□□□□ -1.03
SIN3B-208ENST00000596638 FKBP9P1Q75LS8 142 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 CATSPER4Q7RTX7 472 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 CUZD1Q86UP6 607 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 GPR180Q86V85 440 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 FAM72BQ86X60 149 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 ZNF354CQ86Y25 554 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 CEP97Q8IW35 865 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 MFSD6LQ8IWD5 586 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 TP53INP2Q8IXH6 220 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 PCDH20Q8N6Y1 951 aaKnown RBP8.6□□□□□ -1.03
SIN3B-208ENST00000596638 NPWQ8N729 165 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 CCNYL1Q8N7R7 359 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 LEMD2Q8NC56 503 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 PAPD5Q8NDF8 572 aaKnown RBP8.6□□□□□ -1.03
SIN3B-208ENST00000596638 PNPT1Q8TCS8 783 aaKnown RBP8.6□□□□□ -1.03
SIN3B-208ENST00000596638 AGR3Q8TD06 166 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 HEXDCQ8WVB3 486 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 RSPH1Q8WYR4 309 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 SGF29Q96ES7 293 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 VPS50Q96JG6 964 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 DNAJC1Q96KC8 554 aaKnown RBP8.6□□□□□ -1.03
SIN3B-208ENST00000596638 SLC29A1Q99808 456 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 POMKQ9H5K3 350 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 CAAP1Q9H8G2 361 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 AGO3Q9H9G7 860 aaKnown RBP8.6□□□□□ -1.03
SIN3B-208ENST00000596638 ARNT2Q9HBZ2 717 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 PALMDQ9NP74 551 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 FBXO5Q9UKT4 447 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 MAGED2Q9UNF1 606 aaPredicted RBP8.6□□□□□ -1.03
SIN3B-208ENST00000596638 HES2Q9Y543 173 aa8.6□□□□□ -1.03
SIN3B-208ENST00000596638 SMIM35A0A1B0GVV1 85 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 KANSL1LA0AUZ9 987 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 TYW5A2RUC4 315 aaKnown RBP8.59□□□□□ -1.03
SIN3B-208ENST00000596638 MBLAC1A4D2B0 266 aaPredicted RBP8.59□□□□□ -1.03
SIN3B-208ENST00000596638 A8MT66 165 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 NRP1O14786 923 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 MATN3O15232 486 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 VPS4BO75351 444 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 GPR32O75388 356 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 RECQL4O94761 1208 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 MATN4O95460 622 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 GPIP06744 558 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 UMPSP11172 480 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 DARSP14868 501 aaKnown RBP8.59□□□□□ -1.03
SIN3B-208ENST00000596638 CPB1P15086 417 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 ZNF12P17014 697 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 JUNBP17275 347 aaPredicted RBP8.59□□□□□ -1.03
SIN3B-208ENST00000596638 TPH1P17752 444 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 GPX3P22352 226 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 HMOX2P30519 316 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 HOXC13P31276 330 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 MSX2P35548 267 aaPredicted RBP8.59□□□□□ -1.03
SIN3B-208ENST00000596638 ABCG1P45844 678 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 GLRBP48167 497 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 LEPRP48357 1165 aaKnown RBP8.59□□□□□ -1.03
SIN3B-208ENST00000596638 SLC12A2P55011 1212 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 STX1BP61266 288 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 NME3Q13232 169 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 OLIG2Q13516 323 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 CYTH1Q15438 398 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 SKIV2LQ15477 1246 aaKnown RBP8.59□□□□□ -1.03
SIN3B-208ENST00000596638 ATP6AP1Q15904 470 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 SLC36A3Q495N2 470 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 MTX3Q5HYI7 312 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 ACBD5Q5T8D3 534 aaPredicted RBP8.59□□□□□ -1.03
SIN3B-208ENST00000596638 BTBD8Q5XKL5 378 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 NEPROQ6NW34 567 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 KLHL35Q6PF15 583 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 RANBP10Q6VN20 620 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 CRIPAKQ8N1N5 446 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 TMEM86AQ8N2M4 240 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 RNF169Q8NCN4 708 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 PDPRQ8NCN5 879 aa8.59□□□□□ -1.03
SIN3B-208ENST00000596638 ADAM32Q8TC27 787 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms