RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 BST1Q10588 318 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 TUBB3Q13509 450 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 ALFQ53S48 1182 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 TCHHL1Q5QJ38 904 aaPredicted RBP15.41■□□□□ 0.06
PNKP-204ENST00000594661 RAP1GAP2Q684P5 730 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 OTOP3Q7RTS5 596 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.41■□□□□ 0.06
PNKP-204ENST00000594661 CPSF7Q8N684 471 aaKnown RBP15.41■□□□□ 0.06
PNKP-204ENST00000594661 DNAAF3Q8N9W5 541 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 ZNF420Q8TAQ5 688 aaPredicted RBP15.41■□□□□ 0.06
PNKP-204ENST00000594661 IGSF8Q969P0 613 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 TMEM169Q96HH4 297 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 MECRQ9BV79 373 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 UBP1Q9NZI7 540 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 AFF4Q9UHB7 1163 aaKnown RBP15.41■□□□□ 0.06
PNKP-204ENST00000594661 MYRFQ9Y2G1 1151 aa15.41■□□□□ 0.06
PNKP-204ENST00000594661 DOCK4Q8N1I0 1966 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 FOXD2O60548 495 aaPredicted RBP15.4■□□□□ 0.06
PNKP-204ENST00000594661 ABLIM3O94929 683 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 STX3Q13277 289 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 FAAH2Q6GMR7 532 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 FBXL22Q6P050 247 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 TIFABQ6ZNK6 161 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 AUTS2Q8WXX7 1259 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 TAMM41Q96BW9 452 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 DCUN1D5Q9BTE7 237 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 ZYG11BQ9C0D3 744 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 PRELID1Q9Y255 219 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 SLC30A1Q9Y6M5 507 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 KIAA0100Q14667 2235 aaKnown RBP15.4■□□□□ 0.06
PNKP-204ENST00000594661 KPNA4O00629 521 aaPredicted RBP15.4■□□□□ 0.06
PNKP-204ENST00000594661 ERVK-10P10266 1014 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 JAK1P23458 1154 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 GABRB3P28472 473 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 CRHR1P34998 444 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 KCNQ1P51787 676 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 BMXP51813 675 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 NAB1Q13506 487 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 SF3B4Q15427 424 aaKnown RBP eCLIP15.4■□□□□ 0.064e-8■■■■□ 20.8
PNKP-204ENST00000594661 SPANXN3Q5MJ09 141 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 PPP2R2DQ66LE6 453 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 CARM1Q86X55 608 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 ZNF461Q8TAF7 563 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 ADAMTS16Q8TE57 1224 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 MYEOVQ96EZ4 313 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 RILPQ96NA2 401 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 IL12RB2Q99665 862 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 APOL2Q9BQE5 337 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 HERC2P3Q9BVR0 1158 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 CDH19Q9H159 772 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 BFARQ9NZS9 450 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 RBMX2Q9Y388 322 aaKnown RBP15.4■□□□□ 0.06
PNKP-204ENST00000594661 PSAT1Q9Y617 370 aa15.4■□□□□ 0.06
PNKP-204ENST00000594661 IGLV3-10A0A075B6K4 115 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 CFAP99D6REC4 459 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 KMOO15229 486 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 MATN3O15232 486 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 SNNO75324 88 aaPredicted RBP15.39■□□□□ 0.05
PNKP-204ENST00000594661 TPPPO94811 219 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 ATE1O95260 518 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 TOP3BO95985 862 aaKnown RBP15.39■□□□□ 0.05
PNKP-204ENST00000594661 RHOQP17081 205 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 HMGA1P17096 107 aaKnown RBP15.39■□□□□ 0.05
PNKP-204ENST00000594661 ESRRGP62508 458 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 SPCS2Q15005 226 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 OXA1LQ15070 435 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 NADSYN1Q6IA69 706 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 CIR1Q86X95 450 aaPredicted RBP15.39■□□□□ 0.05
PNKP-204ENST00000594661 CRLF3Q8IUI8 442 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 DEFB107AQ8IZN7 70 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 ZNF669Q96BR6 464 aaPredicted RBP15.39■□□□□ 0.05
PNKP-204ENST00000594661 CERS2Q96G23 380 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 FCRL3Q96P31 734 aaPredicted RBP15.39■□□□□ 0.05
PNKP-204ENST00000594661 STN1Q9H668 368 aaKnown RBP15.39■□□□□ 0.05
PNKP-204ENST00000594661 RPF2Q9H7B2 306 aaKnown RBP15.39■□□□□ 0.05
PNKP-204ENST00000594661 LRRC40Q9H9A6 602 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 SIAEQ9HAT2 523 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 CYP4F11Q9HBI6 524 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 CASS4Q9NQ75 786 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 SIRPGQ9P1W8 387 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 TXNDC16Q9P2K2 825 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 PTPRSQ13332 1948 aa15.39■□□□□ 0.05
PNKP-204ENST00000594661 CCDC195A0A1B0GUA6 201 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 ERI2A8K979 691 aaKnown RBP15.38■□□□□ 0.05
PNKP-204ENST00000594661 NOTOA8MTQ0 251 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 KIAA0355O15063 1070 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 CACNG3O60359 315 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 GJB5O95377 273 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 TMPRSS15P98073 1019 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 RING1Q06587 406 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 CES4AQ5XG92 561 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 XKR5Q6UX68 686 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 LYSMD3Q7Z3D4 306 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 NUDCD3Q8IVD9 361 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 MMAAQ8IVH4 418 aaKnown RBP15.38■□□□□ 0.05
PNKP-204ENST00000594661 CMTR2Q8IYT2 770 aaKnown RBP15.38■□□□□ 0.05
PNKP-204ENST00000594661 UMODL1-AS1Q8N2C9 162 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 TERB1Q8NA31 727 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 OR7G1Q8NGA0 311 aa15.38■□□□□ 0.05
PNKP-204ENST00000594661 SPATA22Q8NHS9 363 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms