RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 ILVBLA1L0T0 632 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 ZNF840PA6NDX5 716 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 TRIM38O00635 465 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 ADAM12O43184 909 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 TSPAN8P19075 237 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 ZNF177Q13360 481 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 PTK2BQ14289 1009 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 TAF1AQ15573 450 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 PPP1R3AQ16821 1122 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 AGKQ53H12 422 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 SLC8B1Q6J4K2 584 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 CHST9Q7L1S5 443 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 CLYBLQ8N0X4 340 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 C19orf60Q96EN9 201 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 CCDC68Q9H2F9 335 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 SYTL2Q9HCH5 934 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 SPO11Q9Y5K1 396 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 STX16-NPEPL1H3BU86 382 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 COCHO43405 550 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 BCAS2O75934 225 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 RHOBTB1O94844 696 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 LYNP07948 512 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 UQCRBP14927 111 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 ARSAP15289 507 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 CES1P23141 567 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 RGRP47804 291 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 ATP4BP51164 291 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 AQP4P55087 323 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 PSME3P61289 254 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 MRPS22P82650 360 aaKnown RBP16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 OR4D1Q15615 310 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 GRAMD1BQ3KR37 738 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 OGFRL1Q5TC84 451 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 REP15Q6BDI9 236 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 FAM126BQ8IXS8 530 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 BHLHE22Q8NFJ8 381 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 HMGCLL1Q8TB92 370 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 EXOC2Q96KP1 924 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 SEZ6LQ9BYH1 1024 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 PDP2Q9P2J9 529 aa16.55■□□□□ 0.24
PRKCSH-217ENST00000592741 CCDC189A1A4V9 331 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 C2orf81A6NN90 581 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 UBXN8O00124 270 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 SNRPB2P08579 225 aaKnown RBP16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 CR2P20023 1033 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 CORO1AP31146 461 aaKnown RBP16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 ALDH1A3P47895 512 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 RPL26P61254 145 aaKnown RBP16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 TCTN1Q2MV58 587 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 USP41Q3LFD5 358 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 OR52E8Q6IFG1 317 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 LARP4Q71RC2 724 aaKnown RBP eCLIP16.54■□□□□ 0.242e-12■■■■□ 20.8
PRKCSH-217ENST00000592741 RNF148Q8N7C7 305 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 OR4K2Q8NGD2 314 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 TDRD1Q9BXT4 1180 aaKnown RBP16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 TAS2R13Q9NYV9 303 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 ADA2Q9NZK5 511 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 CCDC167Q9P0B6 97 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 AGO1Q9UL18 857 aaKnown RBP16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 DTNAQ9Y4J8 743 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 A0A1B0GVM2 712 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 PITPNM1O00562 1244 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 NDUFS3O75489 264 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 SRP72O76094 671 aaKnown RBP16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 PRSS56P0CW18 603 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 GFAPP14136 432 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 RPL17P18621 184 aaKnown RBP16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 FMO4P31512 558 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 OR1D2P34982 312 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 STX1BP61266 288 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 MS4A2Q01362 244 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 TMEM126BQ8IUX1 230 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 REM2Q8IYK8 340 aaPredicted RBP16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 CRIPAKQ8N1N5 446 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 ICA1LQ8NDH6 482 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 LPGAT1Q92604 370 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 LRGUKQ96M69 825 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 ATOH8Q96SQ7 321 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 TCF12Q99081 682 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 SLC25A23Q9BV35 468 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 DERL2Q9GZP9 239 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 SPATS2LQ9NUQ6 558 aaKnown RBP16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 CACNA2D2Q9NY47 1150 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 TRPM5Q9NZQ8 1165 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 PCDHGA7Q9Y5G6 932 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 BACE2Q9Y5Z0 518 aa16.54■□□□□ 0.24
PRKCSH-217ENST00000592741 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 H3BMM5 538 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 KERAO60938 352 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 STC2O76061 302 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 UPP2O95045 317 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 MSX2P35548 267 aaPredicted RBP16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 SGSHP51688 502 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 CDH13P55290 713 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 RAD51Q06609 339 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 MED21Q13503 144 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 LRP8Q14114 963 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 CYTH1Q15438 398 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 PFKFB4Q16877 469 aa16.53■□□□□ 0.24
PRKCSH-217ENST00000592741 GEN1Q17RS7 908 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms