RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 OR4K2Q8NGD2 314 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 BTN2A3PQ96KV6 586 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 PTTG2Q9NZH5 202 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 MOXD2PA6NHM9 499 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 GRK4P32298 578 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 CRY1Q16526 586 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 TBC1D21Q8IYX1 336 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 FBXO27Q8NI29 283 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 TEX12Q9BXU0 123 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 ARL15Q9NXU5 204 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 ATP11BQ9Y2G3 1177 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 TBC1D30Q9Y2I9 924 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 POLR2JP52435 117 aaKnown RBP17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 DEFA1P59665 94 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 DEFA3P59666 94 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 CLCQ05315 142 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 BCL2L1Q07817 233 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 NOMO2Q5JPE7 1267 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 RALGPS2Q86X27 583 aaPredicted RBP17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 CIR1Q86X95 450 aaPredicted RBP17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 ROPN1LQ96C74 230 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 PPP3R2Q96LZ3 170 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 PKP2Q99959 881 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 ASB8Q9H765 288 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 TIMMDC1Q9NPL8 285 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 GDAP2Q9NXN4 497 aa17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 AGO1Q9UL18 857 aaKnown RBP17.11■□□□□ 0.33
SMARCA4-215ENST00000590574 KRT8P05787 483 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 TRIM60Q495X7 471 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 DCBLD1Q8N8Z6 715 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 PSMG2Q969U7 264 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 DNAJC1Q96KC8 554 aaKnown RBP17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 KCNK13Q9HB14 408 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 TPRKBQ9Y3C4 175 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 SNNO75324 88 aaPredicted RBP17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 PBLDP30039 288 aaPredicted RBP17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 CHI3L1P36222 383 aaPredicted RBP17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 PITX1P78337 314 aaPredicted RBP17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 LPIN1Q14693 890 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 RRM2BQ7LG56 351 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 ASB9Q96DX5 294 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 APOL4Q9BPW4 351 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 EPS8L2Q9H6S3 715 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 RREB1Q92766 1687 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 ABCB1P08183 1280 aaPredicted RBP17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 LIPEQ05469 1076 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 TMEM169Q96HH4 297 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 IGKV6-21A0A0C4DH24 114 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 BHMG1C9JSJ3 638 aaPredicted RBP17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 HOXA2O43364 376 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 MRPS15P82914 257 aaKnown RBP17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 HIST2H2ACQ16777 129 aaPredicted RBP17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 HIST2H2AA3Q6FI13 130 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 MOCOSQ96EN8 888 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 GPR21Q99679 349 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 OXCT2Q9BYC2 517 aaPredicted RBP17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 KLHL25Q9H0H3 589 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 DYRK4Q9NR20 520 aa17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 CNOT6Q9ULM6 557 aaKnown RBP17.1■□□□□ 0.33
SMARCA4-215ENST00000590574 MATN2O00339 956 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 KPNA4O00629 521 aaPredicted RBP17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 TLR5O60602 858 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 OTCP00480 354 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 ANXA6P08133 673 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 EDNRBP24530 442 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 EPS8Q12929 822 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 DGCR6Q14129 220 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 PARP15Q460N3 678 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 NADK2Q4G0N4 442 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 ZNF549Q6P9A3 640 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 ZNF621Q6ZSS3 439 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 ZCCHC7Q8N3Z6 543 aaKnown RBP17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 AADATQ8N5Z0 425 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 MED8Q96G25 268 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 PPM1MQ96MI6 270 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 ZBTB26Q9HCK0 441 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 STARD7Q9NQZ5 370 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 GNPTGQ9UJJ9 305 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 A8MT66 165 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 FAM72CH0Y354 149 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 ULK1O75385 1050 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 HSMCR30P0CW71 290 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 NCK1P16333 377 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 PLD1Q13393 1074 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 FAM110CQ1W6H9 321 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 TIGD5Q53EQ6 642 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 FAM72AQ5TYM5 149 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 FAM72DQ6L9T8 149 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 ADCK2Q7Z695 626 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 FAM72BQ86X60 149 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 ALG2Q9H553 416 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 ADAMTS6Q9UKP5 1117 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 OR51F1A6NGY5 319 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 CTPS1P17812 591 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 CCNA2P20248 432 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 ST8SIA6P61647 398 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 NIPAL4Q0D2K0 466 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 LCP2Q13094 533 aa17.09■□□□□ 0.33
SMARCA4-215ENST00000590574 CCDC103Q8IW40 242 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms