RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 CNTD1Q8N815 330 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 PNPLA1Q8N8W4 532 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.24□□□□□ -0.61
SMAD4-211ENST00000590499 PIH1D2Q8WWB5 315 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 CALR3Q96L12 384 aaKnown RBP11.24□□□□□ -0.61
SMAD4-211ENST00000590499 ZNF830Q96NB3 372 aaPredicted RBP11.24□□□□□ -0.61
SMAD4-211ENST00000590499 BAG1Q99933 345 aaPredicted RBP11.24□□□□□ -0.61
SMAD4-211ENST00000590499 SCNM1Q9BWG6 230 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 ALG2Q9H553 416 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 UCKL1Q9NWZ5 548 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 FTSJ1Q9UET6 329 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 PHTF1Q9UMS5 762 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 APOBEC2Q9Y235 224 aaKnown RBP11.24□□□□□ -0.61
SMAD4-211ENST00000590499 PPIL1Q9Y3C6 166 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 HEY1Q9Y5J3 304 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 RAI2Q9Y5P3 530 aa11.24□□□□□ -0.61
SMAD4-211ENST00000590499 KMT2BQ9UMN6 2715 aaPredicted RBP11.23□□□□□ -0.61
SMAD4-211ENST00000590499 CACNA1BQ00975 2339 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 hCG_1818297A0A087WSY0 165 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 NPIPB15A6NHN6 443 aaPredicted RBP11.23□□□□□ -0.61
SMAD4-211ENST00000590499 KCNK1O00180 336 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 TRIM38O00635 465 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 RECQL5O94762 991 aaPredicted RBP11.23□□□□□ -0.61
SMAD4-211ENST00000590499 HEXIM1O94992 359 aaKnown RBP11.23□□□□□ -0.61
SMAD4-211ENST00000590499 IPO7O95373 1038 aaKnown RBP11.23□□□□□ -0.61
SMAD4-211ENST00000590499 PRLP01236 227 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 THBS1P07996 1170 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 MMP2P08253 660 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 PDHA1P08559 390 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 ELFN1P0C7U0 828 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 PECAM1P16284 738 aaPredicted RBP11.23□□□□□ -0.61
SMAD4-211ENST00000590499 SPINK2P20155 84 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 CES1P23141 567 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 VIPR1P32241 457 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 ZBTB17Q13105 803 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 PDK1Q15118 436 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 CNGA3Q16281 694 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 ZNF542PQ5EBM4 170 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 ARMC12Q5T9G4 340 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 MACC1Q6ZN28 852 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 DAAM2Q86T65 1068 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 CHCHD4Q8N4Q1 142 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 LRRC57Q8N9N7 239 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 SPC24Q8NBT2 197 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 CCNYQ8ND76 341 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 OR4C6Q8NH72 309 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 EXD1Q8NHP7 514 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 PDCD6IPQ8WUM4 868 aaKnown RBP11.23□□□□□ -0.61
SMAD4-211ENST00000590499 SCRN2Q96FV2 425 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 CNDP2Q96KP4 475 aaKnown RBP11.23□□□□□ -0.61
SMAD4-211ENST00000590499 COQ10AQ96MF6 247 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 ANP32EQ9BTT0 268 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 TDRD1Q9BXT4 1180 aaKnown RBP11.23□□□□□ -0.61
SMAD4-211ENST00000590499 MAK16Q9BXY0 300 aaKnown RBP11.23□□□□□ -0.61
SMAD4-211ENST00000590499 DNAJC28Q9NX36 388 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 NEUROG3Q9Y4Z2 214 aa11.23□□□□□ -0.61
SMAD4-211ENST00000590499 CELSR3Q9NYQ7 3312 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 A0A0U1RQJ8 604 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 GRID2IPA4D2P6 1211 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 ENC1O14682 589 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 PPP1R12AO14974 1030 aaPredicted RBP11.22□□□□□ -0.61
SMAD4-211ENST00000590499 SIGLEC6O43699 453 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 LZTS3O60299 673 aaPredicted RBP11.22□□□□□ -0.61
SMAD4-211ENST00000590499 CST8O60676 142 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 JCHAINP01591 159 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 KRT10P13645 584 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 CTNNA1P35221 906 aaKnown RBP11.22□□□□□ -0.61
SMAD4-211ENST00000590499 ACADVLP49748 655 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 PEX5P50542 639 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 THOP1P52888 689 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 RP1P56715 2156 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 HNRNPKP61978 463 aaKnown RBP eCLIP11.22□□□□□ -0.61
SMAD4-211ENST00000590499 DYNLT1P63172 113 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 ZNF211Q13398 564 aaPredicted RBP11.22□□□□□ -0.61
SMAD4-211ENST00000590499 MTM1Q13496 603 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 TFDP2Q14188 446 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 PTK2BQ14289 1009 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 NFATC4Q14934 902 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 PRKD1Q15139 912 aaPredicted RBP11.22□□□□□ -0.61
SMAD4-211ENST00000590499 PTPRRQ15256 657 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 PPP2R5EQ16537 467 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 TFDP3Q5H9I0 405 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 FAM182AQ5T1J6 154 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 RCOR2Q8IZ40 523 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 PELI3Q8N2H9 469 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 PLA2G15Q8NCC3 412 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 ZNF548Q8NEK5 533 aaPredicted RBP11.22□□□□□ -0.61
SMAD4-211ENST00000590499 SMIM14Q96QK8 99 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 BRD8Q9H0E9 1235 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 SAE1Q9UBE0 346 aaPredicted RBP11.22□□□□□ -0.61
SMAD4-211ENST00000590499 KLK13Q9UKR3 277 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 TTLL3Q9Y4R7 772 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 PCDHGA1Q9Y5H4 931 aa11.22□□□□□ -0.61
SMAD4-211ENST00000590499 ARHGEF17Q96PE2 2063 aaPredicted RBP11.21□□□□□ -0.61
SMAD4-211ENST00000590499 LAMA5O15230 3695 aa11.21□□□□□ -0.61
SMAD4-211ENST00000590499 ANKRD11Q6UB99 2663 aaPredicted RBP11.21□□□□□ -0.61
SMAD4-211ENST00000590499 A0A0J9YYE9 177 aa11.21□□□□□ -0.61
SMAD4-211ENST00000590499 CAPN8A6NHC0 703 aa11.21□□□□□ -0.61
SMAD4-211ENST00000590499 A8MX80 341 aa11.21□□□□□ -0.61
SMAD4-211ENST00000590499 PSMD11O00231 422 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms