RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 DERAQ9Y315 318 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 SNX9Q9Y5X1 595 aa7.97□□□□□ -1.13
SMAD4-209ENST00000589941 LRP4O75096 1905 aa7.96□□□□□ -1.13
SMAD4-209ENST00000589941 PP2D1A8MPX8 630 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 ANKRD63C9JTQ0 380 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 CLDN5O00501 218 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 HUS1O60921 280 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 NEBLO76041 1014 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 FBXO21O94952 628 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 KNG1P01042 644 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 PRKCGP05129 697 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 NR1D1P20393 614 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 DGKAP23743 735 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 HSD3B2P26439 372 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 MCM7P33993 719 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 PPP3CCP48454 512 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 KIF11P52732 1056 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 ZNF132P52740 706 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 INHBCP55103 352 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 GNG11P61952 73 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 TRIM14Q14142 442 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 SEPT7Q16181 437 aaKnown RBP7.96□□□□□ -1.14
SMAD4-209ENST00000589941 FAM26FQ5R3K3 315 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 BEND6Q5SZJ8 279 aaPredicted RBP7.96□□□□□ -1.14
SMAD4-209ENST00000589941 GUSBP11Q6P575 273 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 RAD9BQ6WBX8 426 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 C4orf50Q6ZRC1 276 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 FAM177A1Q8N128 213 aaPredicted RBP7.96□□□□□ -1.14
SMAD4-209ENST00000589941 ARL14Q8N4G2 192 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 DHX58Q96C10 678 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 CCDC34Q96HJ3 373 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 C8orf48Q96LL4 319 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 C20orf173Q96LM9 149 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 NTPCRQ9BSD7 190 aaKnown RBP7.96□□□□□ -1.14
SMAD4-209ENST00000589941 PARD6BQ9BYG5 372 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 ADNPQ9H2P0 1102 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 PABPC3Q9H361 631 aaKnown RBP7.96□□□□□ -1.14
SMAD4-209ENST00000589941 DPEP3Q9H4B8 488 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 ANKZF1Q9H8Y5 726 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 OSER1Q9NX31 292 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 H2AFY2Q9P0M6 372 aaPredicted RBP7.96□□□□□ -1.14
SMAD4-209ENST00000589941 SIX4Q9UIU6 781 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 AGAP1Q9UPQ3 857 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 SVILO95425 2214 aa7.96□□□□□ -1.14
SMAD4-209ENST00000589941 RP1L1Q8IWN7 2480 aaPredicted RBP7.96□□□□□ -1.14
SMAD4-209ENST00000589941 MID1O15344 667 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 POLR2DO15514 142 aaKnown RBP7.95□□□□□ -1.14
SMAD4-209ENST00000589941 CYP7B1O75881 506 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 SEC31AO94979 1220 aaKnown RBP7.95□□□□□ -1.14
SMAD4-209ENST00000589941 PIGRP01833 764 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 KLKB1P03952 638 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 DNTTP04053 509 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 GP1BAP07359 652 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 PDGFRBP09619 1106 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 ZDHHC11BP0C7U3 371 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 LIPCP11150 499 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 YWHAQP27348 245 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 PCSK1P29120 753 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 OAS2P29728 719 aaKnown RBP7.95□□□□□ -1.14
SMAD4-209ENST00000589941 KRT2P35908 639 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 HNRNPH2P55795 449 aaKnown RBP7.95□□□□□ -1.14
SMAD4-209ENST00000589941 GOLGA8FQ08AF8 430 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 GOLGA8DPQ0D2H9 430 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 CDKN3Q16667 212 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 WHAMMP3Q1A5X7 153 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 POM121L1PQ3SYA9 428 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 TTC31Q49AM3 519 aaPredicted RBP7.95□□□□□ -1.14
SMAD4-209ENST00000589941 FHL5Q5TD97 284 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 CRELD2Q6UXH1 353 aaPredicted RBP7.95□□□□□ -1.14
SMAD4-209ENST00000589941 RBM44Q6ZP01 1051 aaKnown RBP7.95□□□□□ -1.14
SMAD4-209ENST00000589941 ZFAND4Q86XD8 727 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 CNGA4Q8IV77 575 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 CD302Q8IX05 232 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 TMEM86AQ8N2M4 240 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 WDR36Q8NI36 951 aaKnown RBP7.95□□□□□ -1.14
SMAD4-209ENST00000589941 ERMNQ8TAM6 284 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 TSPAN18Q96SJ8 248 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 KCNK16Q96T55 309 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 SAMSN1Q9NSI8 373 aaKnown RBP7.95□□□□□ -1.14
SMAD4-209ENST00000589941 TMEM51Q9NW97 253 aa7.95□□□□□ -1.14
SMAD4-209ENST00000589941 ANKHD1Q8IWZ3 2542 aaKnown RBP7.95□□□□□ -1.14
SMAD4-209ENST00000589941 CCDC168Q8NDH2 2452 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 CCDC187A0A096LP49 1063 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 K7EM74 188 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 NPC1O15118 1278 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 TLR5O60602 858 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 KLHL18O94889 574 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 MYCLP1P12525 358 aaPredicted RBP7.94□□□□□ -1.14
SMAD4-209ENST00000589941 MAT2AP31153 395 aaKnown RBP7.94□□□□□ -1.14
SMAD4-209ENST00000589941 ARHGAP25P42331 645 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 TRAPPC10P48553 1259 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 TUBP50607 506 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 SLC5A3P53794 718 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 ADKP55263 362 aaKnown RBP7.94□□□□□ -1.14
SMAD4-209ENST00000589941 GPS2Q13227 327 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 MANEAQ5SRI9 462 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 SNX30Q5VWJ9 437 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 ZNF776Q68DI1 518 aaPredicted RBP7.94□□□□□ -1.14
SMAD4-209ENST00000589941 ISM2Q6H9L7 571 aa7.94□□□□□ -1.14
SMAD4-209ENST00000589941 NAPEPLDQ6IQ20 393 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms