RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 COQ6Q9Y2Z9 468 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 PCDHA3Q9Y5H8 950 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 RAI2Q9Y5P3 530 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 LRRK1Q38SD2 2015 aa10.41□□□□□ -0.74
SDF2-208ENST00000589788 hCG_1818297A0A087WSY0 165 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 A0A0U1RQJ8 604 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 SPAARA0A1B0GVQ0 90 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 CCDC66A2RUB6 948 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 GRID2IPA4D2P6 1211 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 A8MX80 341 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 PGLSO95336 258 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 HLA-DQB2P05538 268 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 CYP2A6P11509 494 aaPredicted RBP10.4□□□□□ -0.74
SDF2-208ENST00000589788 TGM2P21980 687 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 RXRGP48443 463 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 ARSDP51689 593 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 THOP1P52888 689 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 EPHB1P54762 984 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 RWDD2BP57060 319 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 IFI35P80217 286 aaPredicted RBP10.4□□□□□ -0.74
SDF2-208ENST00000589788 TRIP6Q15654 476 aaKnown RBP10.4□□□□□ -0.74
SDF2-208ENST00000589788 PPP2R5EQ16537 467 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 USP45Q70EL2 814 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 DPPA4Q7L190 304 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 PEX26Q7Z412 305 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 GATAD2AQ86YP4 633 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 TFB1MQ8WVM0 346 aaKnown RBP10.4□□□□□ -0.74
SDF2-208ENST00000589788 CENPTQ96BT3 561 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 NSMCE3Q96MG7 304 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 OLFM3Q96PB7 478 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 CDC6Q99741 560 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 HEMGNQ9BXL5 484 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 TRMT1Q9NXH9 659 aaKnown RBP10.4□□□□□ -0.74
SDF2-208ENST00000589788 TRIM10Q9UDY6 481 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 AMFRQ9UKV5 643 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 PCOLCE2Q9UKZ9 415 aa10.4□□□□□ -0.74
SDF2-208ENST00000589788 TDRD6O60522 2096 aaKnown RBP10.39□□□□□ -0.75
SDF2-208ENST00000589788 CFAP69A5D8W1 941 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 MTSS1O43312 755 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 ADRB1P08588 477 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 PECAM1P16284 738 aaPredicted RBP10.39□□□□□ -0.75
SDF2-208ENST00000589788 CTNNA2P26232 953 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 EPHA8P29322 1005 aaPredicted RBP10.39□□□□□ -0.75
SDF2-208ENST00000589788 VIPR1P32241 457 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 IGFALSP35858 605 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 RALGDSQ12967 914 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 ZBTB17Q13105 803 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 PDE1CQ14123 709 aaPredicted RBP10.39□□□□□ -0.75
SDF2-208ENST00000589788 PTK2BQ14289 1009 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 LAPTM4AQ15012 233 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 ACOX1Q15067 660 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 IRF4Q15306 451 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 SHBQ15464 509 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 ALG1LQ6GMV1 187 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 LIPIQ6XZB0 460 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 DBX2Q6ZNG2 339 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 NT5DC3Q86UY8 548 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 ZC3H18Q86VM9 953 aaKnown RBP10.39□□□□□ -0.75
SDF2-208ENST00000589788 SLC22A18ASQ8N1D0 253 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 C17orf53Q8N3J3 647 aaPredicted RBP10.39□□□□□ -0.75
SDF2-208ENST00000589788 RNF10Q8N5U6 811 aaKnown RBP10.39□□□□□ -0.75
SDF2-208ENST00000589788 UBL4BQ8N7F7 174 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 LRRC57Q8N9N7 239 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 SAP25Q8TEE9 199 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 HAUS1Q96CS2 278 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 AGAP3Q96P47 875 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 IL12RB2Q99665 862 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 CEP41Q9BYV8 373 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 LZTFL1Q9NQ48 299 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 MBNL1Q9NR56 388 aaKnown RBP10.39□□□□□ -0.75
SDF2-208ENST00000589788 DNAJC28Q9NX36 388 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 SAE1Q9UBE0 346 aaPredicted RBP10.39□□□□□ -0.75
SDF2-208ENST00000589788 B4GALT6Q9UBX8 382 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 BTBD3Q9Y2F9 522 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 KCNMB2Q9Y691 235 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 LAMA1P25391 3075 aa10.39□□□□□ -0.75
SDF2-208ENST00000589788 SPTY2D1-AS1A0A0U1RR47 76 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 MIF4GDA9UHW6 222 aaKnown RBP10.38□□□□□ -0.75
SDF2-208ENST00000589788 H3BM21 787 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 TOR1BO14657 336 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 SDC3O75056 442 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 CBFA2T3O75081 653 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 RECQL5O94762 991 aaPredicted RBP10.38□□□□□ -0.75
SDF2-208ENST00000589788 FTCDO95954 541 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 CTPS1P17812 591 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 CD86P42081 329 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 PFN3P60673 137 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 YPEL5P62699 121 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 NIPAL4Q0D2K0 466 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 BNIP3Q12983 259 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 ARHGEF7Q14155 803 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 FZD2Q14332 565 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 PRKD1Q15139 912 aaPredicted RBP10.38□□□□□ -0.75
SDF2-208ENST00000589788 WSCD2Q2TBF2 565 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 DENND2CQ68D51 928 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 BBS12Q6ZW61 710 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 B4GALNT4Q76KP1 1039 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 PARGQ86W56 976 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 EID2Q8N6I1 236 aa10.38□□□□□ -0.75
SDF2-208ENST00000589788 TP53I13Q8NBR0 393 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms